LOCUS ph2j 4708 bp ds-DNA circular SYN 17-Jun-2003 DEFINITION - ACCESSION - KEYWORDS - SOURCE - FEATURES Location/Qualifiers misc_RNA complement(<4..12) /note="SV40 minor late 19S RNA" promoter <4..>348 /note="SV40 promoter" enhancer 26..168 /note="SV40 enhancer elements" misc_feature 173..236 /note="SV40 21bp repeats" rep_origin 193..>328 /note="SV40 Ori" mRNA 242..248 /note="early-late transcription startpoints" mutation 262 /note="G->A kills SELP ATG" mRNA 282..288 /note="early-early transcription start points" CDS 373..1092 /note="EGFP" polyA_signal 1108..>1329 /note="SV40 Late PolyA" promoter <1420..1657 /note="hEF1alpha promoter core" 5'UTR 1665..1952 /note="HTLV R-U5 leader" insertion_seq 1973..1997 /note="attB1" CDS 2068..2745 /note="VP3" misc_recomb 2753..2777 /note="attB2" polyA_signal <2797..3459 /note="hEF1a polyA signal" rep_origin 3460..4193 /note="MB1 Ori" promoter 4194..4280 /note="EM7 promoter" CDS 4281..4655 /note="ShBle (ZeoR)" terminator 4656..4708 /note="terminator (rpmB/G)" BASE COUNT 1163 A 1250 C 1238 G 1055 T 0 OTHER ORIGIN ? 1 CCCCTGTGGA ATGTGTGTCA GTTAGGGTGT GGAAAGTCCC CAGGCTCCCC AGCAGGCAGA 61 AGTATGCAAA GCATGCATCT CAATTAGTCA GCAACCAGGT GTGGAAAGTC CCCAGGCTCC 121 CCAGCAGGCA GAAGTATGCA AAGCATGCAT CTCAATTAGT CAGCAACCAT AGTCCCGCCC 181 CTAACTCCGC CCATCCCGCC CCTAACTCCG CCCAGTTCCG CCCATTCTCC GCCCCATGGC 241 TGACTAATTT TTTTTATTTA TACAGAGGCC GAGGCCGCCT CGGCCTCTGA GCTATTCCAG 301 AAGTAGTGAG GAGGCTTTTT TGGAGGCCTA GGCTTTTGCA AAAAGCTTGA TTGGGATCCA 361 CCGGTCGCCA CCATGGTGAG CAAGGGCGAG GAGCTGTTCA CCGGGGTGGT GCCCATCCTG 421 GTCGAGCTGG ACGGCGACGT AAACGGCCAC AAGTTCAGCG TGTCCGGCGA GGGCGAGGGC 481 GATGCCACCT ACGGCAAGCT GACCCTGAAG TTCATCTGCA CCACCGGCAA GCTGCCCGTG 541 CCCTGGCCCA CCCTCGTGAC CACCCTGACC TACGGCGTGC AGTGCTTCAG CCGCTACCCC 601 GACCACATGA AGCAGCACGA CTTCTTCAAG TCCGCCATGC CCGAAGGCTA CGTCCAGGAG 661 CGCACCATCT TCTTCAAGGA CGACGGCAAC TACAAGACCC GCGCCGAGGT GAAGTTCGAG 721 GGCGACACCC TGGTGAACCG CATCGAGCTG AAGGGCATCG ACTTCAAGGA GGACGGCAAC 781 ATCCTGGGGC ACAAGCTGGA GTACAACTAC AACAGCCACA ACGTCTATAT CATGGCCGAC 841 AAGCAGAAGA ACGGCATCAA GGTGAACTTC AAGATCCGCC ACAACATCGA GGACGGCAGC 901 GTGCAGCTCG CCGACCACTA CCAGCAGAAC ACCCCCATCG GCGACGGCCC CGTGCTGCTG 961 CCCGACAACC ACTACCTGAG CACCCAGTCC GCCCTGAGCA AAGACCCCAA CGAGAAGCGC 1021 GATCACATGG TCCTGCTGGA GTTCGTGACC GCCGCCGGGA TCACTCTCGG CATGGACGAG 1081 CTGTACAAGT AAAGCGGCCG CTTCGAGCAG ACATGATAAG ATACATTGAT GAGTTTGGAC 1141 AAACCACAAC TAGAATGCAG TGAAAAAAAT GCTTTATTTG TGAAATTTGT GATGCTATTG 1201 CTTTATTTGT AACCATTATA AGCTGCAATA AACAAGTTAA CAACAACAAT TGCATTCATT 1261 TTATGTTTCA GGTTCAGGGG GAGGTGTGGG AGGTTTTTTA AAGCAAGTAA AACCTCTACA 1321 AATGTGGTAA AATCGATAAG GATCCGGGCT GGCGTAATAG CGAAGAGGCC CGCACCGATC 1381 GCCCTTCCCA ACAGTTGCGG TGGAGAAGAG CATGCGTGAG GCTCCGGTGC CCGTCAGTGG 1441 GCAGAGCGCA CATCGCCCAC AGTCCCCGAG AAGTTGGGGG GAGGGGTCGG CAATTGAACC 1501 GGTGCCTAGA GAAGGTGGCG CGGGGTAAAC TGGGAAAGTG ATGTCGTGTA CTGGCTCCGC 1561 CTTTTTCCCG AGGGTGGGGG AGAACCGTAT ATAAGTGCAG TAGTCGCCGT GAACGTTCTT 1621 TTTCGCAACG GGTTTGCCGC CAGAACACAG CTGAAGCTTC GAGGGGCTCG CATCTCTCCT 1681 TCACGCGCCC GCCGCCCTAC CTGAGGCCGC CATCCACGCC GGTTGAGTCG CGTTCTGCCG 1741 CCTCCCGCCT GTGGTGCCTC CTGAACTGCG TCCGCCGTCT AGGTAAGTTT AAAGCTCAGG 1801 TCGAGACCGG GCCTTTGTCC GGCGCTCCCT TGGAGCCTAC CTAGACTCAG CCGGCTCTCC 1861 ACGCTTTGCC TGACCCTGCT TGCTCAACTC TACGTCTTTG TTTCGTTTTC TGTTCTGCGC 1921 CGTTACAGAT CCAAGCTGTG ACCGGCGCCT ACGTAAGTGA TAGCTTGATC AAACAAGTTT 1981 GTACAAAAAA GCAGGCTCCG GAGGTACCGG TTCTTCGCCG ATTGGGACCA CAAGGTCAGC 2041 ACCGTCGGCT TGTTCCAACA ACCCGCAATG GCACTGCAGC TGTTCAACCC CGAGGACTAC 2101 TACGACATCC TGTTCCCGGG CGTCAACGCA TTCGTCAACA ACATCCATTA CCTGGACCCA 2161 CGCCACTGGG GGCCCAGCCT GTTTTCGACC ATTAGTCAAG CATTCTGGAA CTTGGTCCGC 2221 GACGACCTGC CAAGCCTGAC CAGCCAAGAG ATCCAGCGCC GCACACAGAA GTTGTTCGTC 2281 GAGTCCCTGG CCCGCTTCCT GGAAGAGACA ACCTGGGCCA TCGTCAACAG CCCCGTCAAT 2341 CTGTACAACT ACATCAGCGA TTACTACTCG CGACTCAGCC CCGTCCGCCC AAGCATGGTC 2401 CGCCAAGTCG CACAGCGCGA AGGCACATAC ATCAGTTTCG GGCATAGCTA TACACAGTCC 2461 ATCGACGACG CCGATTCAAT CCAGGAGGTC ACACAGCGCT TGGACCTGAA GACACCCAAC 2521 GTCCAGAGCG GCGAGTTCAT CGAAAAGTCC ATCGCCCCTG GCGGAGCAAA CCAGCGCAGC 2581 GCACCACAAT GGATGCTGCC ACTGTTGCTG GGCCTCTATG GCACCGTGAC CCCAGCACTG 2641 GAGGCCTACG AGGACGGACC AAACAAGAAA AAGCGCCGCA AGGAAGGCCC AAGGGCATCC 2701 AGCAAGACCA GCTACAAACG TCGGTCCAGG TCCAGCCGCT CCTGAGCCTA GGACCCAGCT 2761 TTCTTGTACA AAGTGGTTCG ATCTAGAATG GCTAGCATTA TCCCTAATAC CTGCCACCCC 2821 ACTCTTAATC AGTGGTGGAA GAACGGTCTC AGAACTGTTT GTTTCAATTG GCCATTTAAG 2881 TTTAGTAGTA AAAGACTGGT TAATGATAAC AATGCATCGT AAAACCTTCA GAAGGAAAGG 2941 AGAATGTTTT GTGGACCACT TTGGTTTTCT TTTTTGCGTG TGGCAGTTTT AAGTTATTAG 3001 TTTTTAAAAT CAGTACTTTT TAATGGAAAC AACTTGACCA AAAATTTGTC ACAGAATTTT 3061 GAGACCCATT AAAAAAGTTA AATGAGAAAC CTGTGTGTTC CTTTGGTCAA CACCGAGACA 3121 TTTAGGTGAA AGACATCTAA TTCTGGTTTT ACGAATCTGG AAACTTCTTG AAAATGTAAT 3181 TCTTGAGTTA ACACTTCTGG GTGGAGAATA GGGTTGTTTT CCCCCCACAT AATTGGAAGG 3241 GGAAGGAATA TCATTTAAAG CTATGGGAGG GTTTCTTTGA TTACAACACT GGAGAGAAAT 3301 GCAGCATGTT GCTGATTGCC TGTCACTAAA ACAGGCCAAA AACTGAGTCC TTGGGTTGCA 3361 TAGAAAGCTT CATGTTGCTA AACCAATGTT AAGTGAATCT TTGGAAACAA AATGTTTCCA 3421 AATTACTGGG ATGTGCATGT TGAAACGTGG GTTAATTAAC TAGCCATGAC CAAAATCCCT 3481 TAACGTGAGT TTTCGTTCCA CTGAGCGTCA GACCCCGTAG AAAAGATCAA AGGATCTTCT 3541 TGAGATCCTT TTTTTCTGCG CGTAATCTGC TGCTTGCAAA CAAAAAAACC ACCGCTACCA 3601 GCGGTGGTTT GTTTGCCGGA TCAAGAGCTA CCAACTCTTT TTCCGAAGGT AACTGGCTTC 3661 AGCAGAGCGC AGATACCAAA TACTGTTCTT CTAGTGTAGC CGTAGTTAGG CCACCACTTC 3721 AAGAACTCTG TAGCACCGCC TACATACCTC GCTCTGCTAA TCCTGTTACC AGTGGCTGCT 3781 GCCAGTGGCG ATAAGTCGTG TCTTACCGGG TTGGACTCAA GACGATAGTT ACCGGATAAG 3841 GCGCAGCGGT CGGGCTGAAC GGGGGGTTCG TGCACACAGC CCAGCTTGGA GCGAACGACC 3901 TACACCGAAC TGAGATACCT ACAGCGTGAG CTATGAGAAA GCGCCACGCT TCCCGAAGGG 3961 AGAAAGGCGG ACAGGTATCC GGTAAGCGGC AGGGTCGGAA CAGGAGAGCG CACGAGGGAG 4021 CTTCCAGGGG GAAACGCCTG GTATCTTTAT AGTCCTGTCG GGTTTCGCCA CCTCTGACTT 4081 GAGCGTCGAT TTTTGTGATG CTCGTCAGGG GGGCGGAGCC TATGGAAAAA CGCCAGCAAC 4141 GCGGCCTTTT TACGGTTCCT GGCCTTTTGC TGGCCTTTTG CTCACATGTT CTTAATTAAA 4201 TTTTTCAAAA GTAGTTGACA ATTAATCATC GGCATAGTAT ATCGGCATAG TATAATACGA 4261 CTCACTATAG GAGGGCCATC ATGGCCAAGT TGACCAGTGC TGTCCCAGTG CTCACAGCCA 4321 GGGATGTGGC TGGAGCTGTT GAGTTCTGGA CTGACAGGTT GGGGTTCTCC AGAGATTTTG 4381 TGGAGGATGA CTTTGCAGGT GTGGTCAGAG ATGATGTCAC CCTGTTCATC TCAGCAGTCC 4441 AGGACCAGGT GGTGCCTGAC AACACCCTGG CTTGGGTGTG GGTGAGAGGA CTGGATGAGC 4501 TGTATGCTGA GTGGAGTGAG GTGGTCTCCA CCAACTTCAG GGATGCCAGT GGCCCTGCCA 4561 TGACAGAGAT TGGAGAGCAG CCCTGGGGGA GAGAGTTTGC CCTGAGAGAC CCAGCAGGCA 4621 ACTGTGTGCA CTTTGTGGCA GAGGAGCAGG ACTGAGGATA AGAATTGTAA CAAAAAACCC 4681 CGCCCCGGCG GGGTTTTTTG TTAATTAA //