LOCUS PADAP-L1 ( 5392 BP DS-DNA CIRCULAR SYN 30-JUN-1997 DEFINITION - ACCESSION - KEYWORDS - SOURCE - FEATURES Location/Qualifiers promoter 1..>589 /note="CMV promoter" enhancer 59..465 /note="enhancer" TATA_signal 554..560 /note="TATA" mRNA 583..583 /note="transcription start" CDS 641..>2129 /note="L1" mutation 929..931 /note="this Ala is a Pro in Zhou's L1" mutation 989..991 /note="This Pro is a Thr in Zhou's L1" polyA_site 2211..2216 /note="pA signal" polyA_signal 2211..2261 /note="SV40 early polyA " polyA_site 2240..2245 /note="pA signal" polyA_site 2249..2249 /note="mRNA 3' end" polyA_site 2261..2261 /note="mRNA 3' end" rep_origin 2308..2763 /note="F1 Ori" -35_signal 2825..2830 /note="-35 region" promoter 2825..2860 /note="bacterial promoter" -10_signal 2848..2853 /note="-10 region" misc_RNA 2860..2860 /note="transcription start" enhancer 2937..3080 /note="SV40 enhancer elements" misc_feature 3084..3147 /note="SV40 21bp repeats" rep_origin 3104..3239 /note="SV40 Ori" mRNA 3156..3205 /note="SV40 transcription start points" promoter 3160..>3166 /note="SV40 promoter" CDS 3288..4082 /note="Kan/Neo" polyA_signal 4260..4529 /note="HSV TK pA signal" polyA_site 4318..4336 /note="HSV TK pA sites" rep_origin 4667..5310 /note="PUC Ori" BASE COUNT 1313 A 1504 C 1403 G 1172 T 0 OTHER ORIGIN - 1 TAGTTATTAA TAGTAATCAA TTACGGGGTC ATTAGTTCAT AGCCCATATA TGGAGTTCCG 61 CGTTACATAA CTTACGGTAA ATGGCCCGCC TGGCTGACCG CCCAACGACC CCCGCCCATT 121 GACGTCAATA ATGACGTATG TTCCCATAGT AACGCCAATA GGGACTTTCC ATTGACGTCA 181 ATGGGTGGAG TATTTACGGT AAACTGCCCA CTTGGCAGTA CATCAAGTGT ATCATATGCC 241 AAGTACGCCC CCTATTGACG TCAATGACGG TAAATGGCCC GCCTGGCATT ATGCCCAGTA 301 CATGACCTTA TGGGACTTTC CTACTTGGCA GTACATCTAC GTATTAGTCA TCGCTATTAC 361 CATGGTGATG CGGTTTTGGC AGTACATCAA TGGGCGTGGA TAGCGGTTTG ACTCACGGGG 421 ATTTCCAAGT CTCCACCCCA TTGACGTCAA TGGGAGTTTG TTTTGGCACC AAAATCAACG 481 GGACTTTCCA AAATGTCGTA ACAACTCCGC CCCATTGACG CAAATGGGCG GTAGGCGTGT 541 ACGGTGGGAG GTCTATATAA GCAGAGCTGG TTTAGTGAAC CGTCAGATCC GCTAGCGCTA 601 CCGGACTCAG ATCTCGAGAA TTCACGCGTG GTACCACACC ATGGCCCTCT GGCAGCAGGG 661 GCAGAAACTC TACCTGCCAC CCACACCCGT GTCAAAAGTC CTGTGTTCCG AGACATACGT 721 CCAGCGGAAG TCAATCTTCT ACCACGCCGA GACCGAAAGG CTCCTCACCA TCGGCCACCC 781 CTACTACCCC GTCAGCATTG GCGCTAAGAC CGTGCCCAAA GTCTCCGCCA ACCAATACCG 841 CGTGTTCAAG ATCCAGCTGC CCGACCCAAA CCAGTTCGCC CTGCCCGATC GCACCGTGCA 901 TAACCCCTCC AAGGAAAGAC TCGTCTGGGC CGTGATCGGC GTCCAAGTCT CACGGGGCCA 961 ACCCCTGGGC GGCACCGTGA CCGGCCATCC AACCTTCAAC GCCCTCCTGG ACGCCGAGAA 1021 CGTCAACCGG AAAGTCACAA CACAAACCAC CGACGATCGC AAGCAGACCG GGCTGGACGC 1081 CAAACAGCAG CAAATCCTCC TCCTGGGGTG CACACCCGCT GAGGGCGAGT ACTGGACCAC 1141 CGCTCGGCCC TGCGTGACCG ACAGGCTGGA GAACGGGGCT TGTCCCCCCC TGGAGCTGAA 1201 GAATAAGCAT ATCGAGGACG GCGACATGAT GGAGATCGGC TTCGGCGCCG CTAACTTCAA 1261 GGAGATCAAC GCCTCCAAGA GCGACCTGCC CCTGGATATC CAGAACGAAA TTTGTCTCTA 1321 TCCCGATTAT CTGAAGATGG CCGAAGATGC CGCCGGCAAC TCAATGTTTT TCTTCGCCCG 1381 CAAGGAGCAA GTCTACGTGC GGCATATTTG GACACGGGGC GGGAGCGAAA AGGAGGCTCC 1441 CACAACCGAC TTCTACCTGA AAAACAACAA GGGCGACGCT ACACTGAAGA TCCCATCCGT 1501 CCACTTCGGC TCCCCATCCG GGAGCCTCGT CAGCACCGAC AACCAGATCT TCAACAGACC 1561 ATATTGGCTG TTTAGGGCTC AAGGGATGAA TAACGGCATC GCTTGGAACA ACCTGCTCTT 1621 CCTGACCGTC GGCGATAACA CCAGGGGCAC CAACCTGACA ATCTCCGTGG CTAGCGACGG 1681 CACACCCCTG ACCGAATACG ACTCAAGCAA GTTTAACGTG TATCACCGGC ACATGGAGGA 1741 GTACAAACTG GCTTTCATCC TGGAACTGTG TAGCGTCGAG ATTACCGCCC AGACCGTCAG 1801 CCACCTCCAG GGCCTGATGC CAAGCGTCCT GGAGAACTGG GAGATCGGCG TCCAACCACC 1861 AACAAGCAGC ATCCTGGAAG ATACATACAG ATACATCGAA AGCCCCGCCA CCAAGTGCGC 1921 CTCAAACGTG ATCCCCGCCA AGGAGGATCC CTACGCCGGC TTCAAATTCT GGAATATCGA 1981 CCTGAAGGAG AAACTGAGCC TCGATCTGGA CCAGTTCCCA CTCGGCCGGC GGTTCCTGGC 2041 CCAACAGGGC GCTGGCTGCA GCACCGTCCG GAAGAGGCGG ATCTCACAAA AGACCAGTTC 2101 CAAACCCGCC AAGAAGAAGA AGAAGTAGGC CTCTAGAGCG GCCGCCACCG CGGTGGCTAG 2161 AGGGCCAATT GTTGTTGTTA ACTTGTTTAT TGCAGCTTAT AATGGTTACA AATAAAGCAA 2221 TAGCATCACA AATTTCACAA ATAAAGCATT TTTTTCACTG CATTCTAGTT GTGGTTTGTC 2281 CAAACTCATC AATGTATCTT AAGGCGTAAA TTGTAAGCGT TAATATTTTG TTAAAATTCG 2341 CGTTAAATTT TTGTTAAATC AGCTCATTTT TTAACCAATA GGCCGAAATC GGCAAAATCC 2401 CTTATAAATC AAAAGAATAG ACCGAGATAG GGTTGAGTGT TGTTCCAGTT TGGAACAAGA 2461 GTCCACTATT AAAGAACGTG GACTCCAACG TCAAAGGGCG AAAAACCGTC TATCAGGGCG 2521 ATGGCCCACT ACGTGAACCA TCACCCTAAT CAAGTTTTTT GGGGTCGAGG TGCCGTAAAG 2581 CACTAAATCG GAACCCTAAA GGGAGCCCCC GATTTAGAGC TTGACGGGGA AAGCCGGCGA 2641 ACGTGGCGAG AAAGGAAGGG AAGAAAGCGA AAGGAGCGGG CGCTAGGGCG CTGGCAAGTG 2701 TAGCGGTCAC GCTGCGCGTA ACCACCACAC CCGCCGCGCT TAATGCGCCG CTACAGGGCG 2761 CGTCAGGTGG CACTTTTCGG GGAAATGTGC GCGGAACCCC TATTTGTTTA TTTTTCTAAA 2821 TACATTCAAA TATGTATCCG CTCATGAGAC AATAACCCTG ATAAATGCTT CAATAATATT 2881 GAAAAAGGAA GAGTCCTGAG GCGGAAAGAA CCAGCTGTGG AATGTGTGTC AGTTAGGGTG 2941 TGGAAAGTCC CCAGGCTCCC CAGCAGGCAG AAGTATGCAA AGCATGCATC TCAATTAGTC 3001 AGCAACCAGG TGTGGAAAGT CCCCAGGCTC CCCAGCAGGC AGAAGTATGC AAAGCATGCA 3061 TCTCAATTAG TCAGCAACCA TAGTCCCGCC CCTAACTCCG CCCATCCCGC CCCTAACTCC 3121 GCCCAGTTCC GCCCATTCTC CGCCCCATGG CTGACTAATT TTTTTTATTT ATGCAGAGGC 3181 CGAGGCCGCC TCGGCCTCTG AGCTATTCCA GAAGTAGTGA GGAGGCTTTT TTGGAGGCCT 3241 AGGCTTTTGC AAAGATCGAT CAAGAGACAG GATGAGGATC GTTTCGCATG ATTGAACAAG 3301 ATGGATTGCA CGCAGGTTCT CCGGCCGCTT GGGTGGAGAG GCTATTCGGC TATGACTGGG 3361 CACAACAGAC AATCGGCTGC TCTGATGCCG CCGTGTTCCG GCTGTCAGCG CAGGGGCGCC 3421 CGGTTCTTTT TGTCAAGACC GACCTGTCCG GTGCCCTGAA TGAACTGCAA GACGAGGCAG 3481 CGCGGCTATC GTGGCTGGCC ACGACGGGCG TTCCTTGCGC AGCTGTGCTC GACGTTGTCA 3541 CTGAAGCGGG AAGGGACTGG CTGCTATTGG GCGAAGTGCC GGGGCAGGAT CTCCTGTCAT 3601 CTCACCTTGC TCCTGCCGAG AAAGTATCCA TCATGGCTGA TGCAATGCGG CGGCTGCATA 3661 CGCTTGATCC GGCTACCTGC CCATTCGACC ACCAAGCGAA ACATCGCATC GAGCGAGCAC 3721 GTACTCGGAT GGAAGCCGGT CTTGTCGATC AGGATGATCT GGACGAAGAG CATCAGGGGC 3781 TCGCGCCAGC CGAACTGTTC GCCAGGCTCA AGGCGAGCAT GCCCGACGGC GAGGATCTCG 3841 TCGTGACCCA TGGCGATGCC TGCTTGCCGA ATATCATGGT GGAAAATGGC CGCTTTTCTG 3901 GATTCATCGA CTGTGGCCGG CTGGGTGTGG CGGACCGCTA TCAGGACATA GCGTTGGCTA 3961 CCCGTGATAT TGCTGAAGAG CTTGGCGGCG AATGGGCTGA CCGCTTCCTC GTGCTTTACG 4021 GTATCGCCGC TCCCGATTCG CAGCGCATCG CCTTCTATCG CCTTCTTGAC GAGTTCTTCT 4081 GAGCGGGACT CTGGGGTTCG AAATGACCGA CCAAGCGACG CCCAACCTGC CATCACGAGA 4141 TTTCGATTCC ACCGCCGCCT TCTATGAAAG GTTGGGCTTC GGAATCGTTT TCCGGGACGC 4201 CGGCTGGATG ATCCTCCAGC GCGGGGATCT CATGCTGGAG TTCTTCGCCC ACCCTAGGGG 4261 GAGGCTAACT GAAACACGGA AGGAGACAAT ACCGGAAGGA ACCCGCGCTA TGACGGCAAT 4321 AAAAAGACAG AATAAAACGC ACGGTGTTGG GTCGTTTGTT CATAAACGCG GGGTTCGGTC 4381 CCAGGGCTGG CACTCTGTCG ATACCCCACC GAGACCCCAT TGGGGCCAAT ACGCCCGCGT 4441 TTCTTCCTTT TCCCCACCCC ACCCCCCAAG TTCGGGTGAA GGCCCAGGGC TCGCAGCCAA 4501 CGTCGGGGCG GCAGGCCCTG CCATAGCCTC AGGTTACTCA TATATACTTT AGATTGATTT 4561 AAAACTTCAT TTTTAATTTA AAAGGATCTA GGTGAAGATC CTTTTTGATA ATCTCATGAC 4621 CAAAATCCCT TAACGTGAGT TTTCGTTCCA CTGAGCGTCA GACCCCGTAG AAAAGATCAA 4681 AGGATCTTCT TGAGATCCTT TTTTTCTGCG CGTAATCTGC TGCTTGCAAA CAAAAAAACC 4741 ACCGCTACCA GCGGTGGTTT GTTTGCCGGA TCAAGAGCTA CCAACTCTTT TTCCGAAGGT 4801 AACTGGCTTC AGCAGAGCGC AGATACCAAA TACTGTCCTT CTAGTGTAGC CGTAGTTAGG 4861 CCACCACTTC AAGAACTCTG TAGCACCGCC TACATACCTC GCTCTGCTAA TCCTGTTACC 4921 AGTGGCTGCT GCCAGTGGCG ATAAGTCGTG TCTTACCGGG TTGGACTCAA GACGATAGTT 4981 ACCGGATAAG GCGCAGCGGT CGGGCTGAAC GGGGGGTTCG TGCACACAGC CCAGCTTGGA 5041 GCGAACGACC TACACCGAAC TGAGATACCT ACAGCGTGAG CTATGAGAAA GCGCCACGCT 5101 TCCCGAAGGG AGAAAGGCGG ACAGGTATCC GGTAAGCGGC AGGGTCGGAA CAGGAGAGCG 5161 CACGAGGGAG CTTCCAGGGG GAAACGCCTG GTATCTTTAT AGTCCTGTCG GGTTTCGCCA 5221 CCTCTGACTT GAGCGTCGAT TTTTGTGATG CTCGTCAGGG GGGCGGAGCC TATGGAAAAA 5281 CGCCAGCAAC GCGGCCTTTT TACGGTTCCT GGCCTTTTGC TGGCCTTTTG CTCACATGTT 5341 CTTTCCTGCG TTATCCCCTG ATTCTGTGGA TAACCGTATT ACCGCCATGC AT //