LOCUS p____EF__MusPV_i 9377 bp DNA circular SYN 17-Jun-2003 DEFINITION . FEATURES Location/Qualifiers source <8040..8128 /note="hEF1a polyA signal (fragment)" primer_bind 24..45 /note="Asylum-R primer" CDS <114..152 /note="L1 [Split]" misc_recomb 114..119 /note="Flanking Xba" CDS 762..1184 /note="E6" CDS 1184..1516 /note="E7" CDS 1503..3365 /note="E1" CDS join(1503..1518,3900..4180) /note="E1^E4" CDS 3295..4446 /note="E2" CDS 3863..4180 /note="E4 ORF" CDS 3878..3892 /note="LLXLL keratin binding motif" CDS 3886..3899 /note="E1^E4 splice acceptor" CDS 4506..6122 /note="L2" CDS 6133..7629 /note="L1 [Split]" misc_recomb 7624..7629 /note="Flanking Xba" primer_bind complement(7689..7710) /note="Asylum-L primer" terminator complement(7785..7828) /note="rrnB T1 terminator" rRNA complement(7832..7951) /note="5S rRNA fragment (rrnB operon)" rep_origin 8129..8862 /note="MB1 Ori" promoter 8863..8949 /note="EM7 promoter" CDS 8950..9324 /note="Zeocin resistance" terminator 9325..9377 /note="rpm B/G terminator" BASE COUNT 2502 A 2045 C 2397 G 2433 T 0 OTHER ORIGIN 1 CCCTGCAGGG CCTGAAATAA CCTCTGAAAG AGGAACTTGG TTAGGTACGC AACTGTTGGG 61 AAGGGCGATC GGTGCGGGCC TCTTCGCTAT TACGCCAGCC CGGATCTGAT GATTCTAGAC 121 GAGTTGTAAA ACGGAAGAGG GGAAGCAAAT AACTGAACTG GTGCTACTAA CTGAATGACT 181 CCGGTATTAT GAAGTTCTTG TATTGTATAA CTGTTTACTG GGGGCTTACT GTGTATAGGG 241 GGCTTGAGTT GTTTGTCTGT TCTTGTCCAT GTCCTTGTGA TGTACTTTTG CAACTTAAAT 301 AAATGACTAA TGCTGACCAG TGTGCCTCGC CTCATTCTTT AGCTCGCACC TGGGCTCACT 361 TTGTGCCAGA CTGTCATAAC AAACAGTCTC TGTTGGCTGT GTGCTCTCTA ATTTCTCGAA 421 AAGACGTGTT TTGACGAAGG ACCGTTTTCG GTCGGGCGCC AGTATCAGCA TAAACTCCAG 481 CCAATTTGGC CAAGGTAAGG AAATGACTAA CTGTCTTGGA ACAGATGCGT GTCCTGGCAA 541 TTATCCGCGT ACCGTTTTCG GTCGGGTAAA AAAGGCGCCA AGCTAAGCAT GATTCAGAGT 601 TCCATTGTGT TCTGCCAAGT ACAGGTGTGG TGTTCTGGAA CGGTCGTACA ATTAATCTTT 661 GAGCTGATGG TTGGCAACAA TTATTTCCCT CTGAAAAAAT TTAGGTGGAG CGGGAACGGT 721 CGCATATAAG TATCAGTGTG CCCCCATAAC CGTATTCGTT CATGGAAATC GGCAAAGGCT 781 ACACTCTCGA GGAGGTGCTT AGATATTCTA ACAAAGATGT CGTGGATTTT CATTTGTCTT 841 GTGCTTTTTG CTCTACTACT ATGGATCATA ACGAGAAGGC CAGATTCATA CAGGCTAAAT 901 TGAAATGTGT TGTTAGAGAT TTTGCTTTTA AAGGTGCTTG TATTGTGTGC CGCAGACAGC 961 TTGCTTGCAA GGAAAAGCTT TTGCATACTA GAGTTACAGG GGAGGCTGAT TTGGTAGAGT 1021 GCATGGCTGG CAAGAATATT GTGTTTGTTA CTGTAAGATG TGTTACGTGC CTGGCACTCC 1081 TTACTGCCTC TGAAAAGCTT GATGCCAAAG CGTGCGGCTT GCCATTTCAC TTGGTGCGCC 1141 ACATGTGGAG AGGCTACTGC GGGTTCTGCA AACCATTACT ATAATGCAGG GCCCATTACC 1201 AACAATTGCT GACATCGAGA TTCAGAATCT CGACTCACTT TTGGGTGTTG GTGAGCCTGA 1261 CCTACCCGAT GTTGGGTCAT CATCGTTGTC ACCAGACTCG TTAGGAGAAG AGGAGGAGCT 1321 GGAGCTGGAG ACTATCGATG TAGATCCTTA CAGGATTAAA ACAACCTGCT TTTGCTGCGA 1381 CACTGTTCTC CGGTTCATAA TTGTGACCGG AGACGACTCG GTGAAAGCAT TCGAGTCACT 1441 GCTTCTGCAG GATCTTAGCT TTGTCTGCCC GCACTGCGTC GCGTCGTACG TGAACCTCAG 1501 AAATGGAAAA CGATAAAGGT ACAGGGCAGT ATTCTGGATG GTGTTTTATA GATAATGAGG 1561 CTGAATGTGT GGATGATGTG GGTTCCTTGG ATAACTTAGA GGCATTGTTT GAGCAGAGTA 1621 CCCAGGGATC ATTCATTGAC AATGATGAGG TGGATCAGGG AAATTCCTTG GCATTGCTTT 1681 CAGAGCAGTT ATTTGCAACT GATGAGCAAC AGATTGCAGC CCTAAAACGA AAGTATGCCG 1741 CGACACCTAA GAAAAAAACG GTAGAAATCG AAAATCTGAG TCCTAGATTA GAGTCCGTCA 1801 GCATTTCACC TAAAGGAAAG AGCAGGAGAC GGTTGTTTGA CAGCGGAATA GGACATGAAA 1861 CTCAAGATAC TCCTTCGGGG AGCGAGGTAC CTATGAGCAT ATCTGGGTCT AGTTCAGCCA 1921 ATTCAAGCAT AGGAAGCCAG TGCGAGAGCG AGCAGGTAAA TAGTAACACT TTGATTTCTT 1981 CTGAAGATTT GCTTAGAACA AGTAATAGAT TGGCAGGGTG CTATGCGAGG TTTAAGGAGG 2041 CATTTGGGTG CAGCTTCACC GATCTAACGC GTAGCTTTAA GAGTGATAAG ACATGTAGTC 2101 CGAATTGGGT CGTAGCTGTG TTTGGGGCTA GAGAACATTT GTTGCAGGCC TTACATGATG 2161 TGTGGAAGAA CACCTATGAG TACTGCCAAG ATACAACAAG TTATGCAGGG AATAGAAAGG 2221 TGAACTTGCT GCTTATGGAG CTGAAGGTAG GTAGGAGCAG ACTCACATTG CGGAGACAGC 2281 TTTCCGCCAT GTTAGGTGTG GATGAGTTGT TAATACTCGC CGATCCGCCG AACGAGCGGA 2341 GCACGCTCGC CGCACTTTAT TTTTATAATA AGGTTTTATT TAAAAGTCCT TCTACCATGT 2401 TTTACGGTAG CACCCCGCTG TGGATAGCCA GCAAGACACT ACTAGAGCAT GCTAGTGCAA 2461 CAGCCGAGTC CTTTGATTTC AGTAGTATGG TGCAGTGGGC ATATGACAAT AGACTAAATG 2521 AGGAGGCAGA AATAGCTTAT AAATATGCCT TAGAAGCAGA CAGCAATAAG AATGCCCAAG 2581 CGTGGCTTAA GACTACAAAC CAGGTAAAGC ATGTCCGAGA CTGCTGTGCA ATGGTCAGGC 2641 TATATAACAG GCAGGAAATG AAGGAAATGA CAATGGCTCA GTGGATACGG AAGTGCTGCG 2701 ATGAGACAGA GGAAGAAGGG GACTGGAAGG TTATTGCAAA CTTCCTTAGA TACCAGGAAG 2761 TCAACCTCAT ACTGCTGCTT ACAGCACTTA GGCATATGTT TAAGGGTACT CCTAAAAAAC 2821 ACTGCCTCGT TATCACAGGT CCCCCAGATA CTGGGAAGTC ATATTTCTGT AATAGTCTGA 2881 ATGGGTTTCT TAAAGGTCGT GTAATTTCAT TTATGAACAG TAGGAGTCAG TTCTGGCTGC 2941 AGCCTTTAGC AGATGCAAAA ATGGGGTTCC TAGATGATGC TACAACCGCT TGCTGGAACT 3001 TTATGGATGT ATATATGCGG AATGCATTAG ATGGCAATCC CATGCAGCTT GACATTAAGC 3061 ATAGAGCACC TTTGCAGCTT AAGCTACCTC CGCTACTAAT TACCTCAAAT GTAGATGTCA 3121 TGAATAATGA CAATTTCAGA TATCTACATA GCAGGTTGCA GGCCTTTGAG TTTCATAAGC 3181 CTATGCCTTT AACAGCTAAT GGGCAGCCAG TATATCCCCT TACTAAAGCT AATTGGAAAT 3241 CTTTTTTTAC AAGGCTGGCT AATCAATTAG GAATCGAAGA GGAGGAGGGC GAGAATGAAC 3301 AGCCTGGAAA CACGTTTCGA TGCAGTGCAA GACCAGATAC TGAACCTTTA CGAGAAAGGC 3361 AGTAAATGTT TAGCGGACCA CATACTATAT TGGGAGCTTG TTAGGAAAGA AGGAGCATTG 3421 CAATTCTGTG CTCGTAGAGG GGGACTCAAC AAGCTCGGAC TGCAACCCCT ACCCAGCACC 3481 ATAGGAGCTG AGAACAAGGC CAAAAGGGCA ATTCAGATGC AATTGGTGCT AACATCTCTC 3541 AATGAATCAC CCTTTGGCTC CGAGGAGTGG ACAATGGCTG AAACTAGCCG TGAGATGTAT 3601 GACAGCACTG AGCCGTATGG GACTTTTAAA AAAAGTGGCG AGGAGGTGGA AGTCTATTAT 3661 GGAGGAGATG AAGATAATAA TGTGTCTTAT ATGCTCTGGA AGTATGTCTA TGCCCAGGAT 3721 GAGAACGGCA ACTGGCATAA GTATCAGAGC GATTGTGACT ATTATGGTGT ACATTACACT 3781 GACCACAGTG GGACCCGTAT CTATTATCAT GATTTTGACA GTGATTCTCG CAGATATGGG 3841 GATTATTCTC ACTGGACTGT GAATTATAAA CACAAAACTT TTGAATCTTC TCCTGATAGC 3901 TCCTCCTCAG CCAAAGAAGG GCATCAAAAA ACAACCAGAC GGCCCGAAGA CAACACCGCC 3961 ACGAAGAGAA CTCTTCCCAC CGACACCACT GACACAGCCG CCCCCGCCGG AGACACCATT 4021 TGGGGACGAG GCGGAGGAGT ACGACTCGGA CAAGGAGAAC GACAAACCTG CATCCGGAAA 4081 GCTTGGTCAA GCGCTGCAGA GACTCCAGCA GGACCTGAGG GATCTGCAGG ACCTTGTCAA 4141 CCAAACAACA GCCGGCATCA CCATACTCAT AGGCCAATAA TCTCTGTCAA AGGTCCGACT 4201 AACTCTTTAA AATGCTGGCG GAATAGGTTG CGTCGGAGAA CATATAAGCC ATATAGCCGT 4261 GTATCTACTG CCTTTCAGTG GGTTGAGGAC AGGGCGGACG GGGTAGAGGT GGGGGATAGG 4321 TGGCAGGTTA GCTTTAGCAA TGTACTTGTA GCTTTTGCAG ACACGTATCA AAAAGAAGTG 4381 TTTCTAAAGA CTGTGACACT GCCCAAGGGC TGCTCATACA CCAGTGGCTT CTTAGACGGA 4441 CTCTGATAGT GGATTCTATA CACCATCCAG AATTACTGTA CCTGTTAGAT TATTTTTGTA 4501 CCATTATGGT GTCTGCTGAC AGAAGCAGGC GCGTCAAGAG GGACTCTGCG TCAAACCTAT 4561 ACAGACAATG TCAAGTAACC GGGAATTGTC CACCTGATGT AGTCAATAAA GTCGAAGGAA 4621 ACACACTTGC TGACAGGATT CTTAAAGTTA TTAGTAGCAT TGTATACTTG GGGGGGCTGG 4681 GCATTGGAAC TGGCAGAGGC TCCGGGGGCA CCACTGGCTA TGGGCCCATA AACTCTGCTG 4741 GTGGAAGGGT AACAGGCACA GGCACGGTCA TGAGGCCTGG TGTCACTGTT GAGCCCATTG 4801 GCCCAGGGGA CATAGTCACT GTAGACTCTG TGGGCCCTGG AGATTCGAGC CTTATTCCTC 4861 TACTTGAGGT GACCCCCGAT GTCCCTATAA ATGGGGGACC CGAGGTTCCT TCTAGTGGGC 4921 CAGACATAAG CACAGTGGAC GTGACATCTA GCATAGACCC AATATCAGAC CTGTCTGTGA 4981 CTGGCACCAC AATCTCCAAC ACAGACTCTG CTGTCATTGA TGTTCAGCCA TCCCCGGGCC 5041 CTCGTAGAGT CATAATCACT AGAAGTGACT TTAATAACCC CTCCTATGTG TCTGTTGTGC 5101 ACCCCACACA GGGGTTGGGG GAGTCTGGGG GTGTCATTAG TGGAGAAAGT GGAGGCATAA 5161 TATCCAGCAT ACATGAGCTG GATAACACCA CAGTCATAGG TGCTAGGCCA CCACCTGAAA 5221 GGATATTGGA TGAGGTACCA GGACCCTTTG AGGACATTGT GCTTGACACA TTTGTTGAGT 5281 CTAGTGGTCT TAGTGAGTTT GACATAGAGC AGCCCCTCAC TAGCACACCT GAAGGCCCGT 5341 TGCAAAGGGC GGCCACTAGA TTCAGAGACC TGTATAATAG GCGGGTGCAG CAGGTGCGTG 5401 TATCCAATCC AGAAGCTTTT CTAACTGGTC CCAGACAGGC GGTAGTATTT GAAAATCCCG 5461 CCTTTGAGCC TGGGAGCCTG GATTTTGAAC TTCCCGCCAG TCCTCCTGTA GCTGCACCTG 5521 ACCCTGAGTA CACTGATGTG GTCCACCTAG GGCGTCAGAG GTTCTCTGAG GTGAACAGAG 5581 TAATTAGAGT GAGCAGGTTG GGGCAACGTG CATCTATGAA GACTAGGAGT GGTCTTATAA 5641 TTGGTGGGAA AGTGCACTTC TATACAGATT TATCCCCTGT TGCTACGGAC ATTGAAATGC 5701 ACACATTAGG TGAGATCAGT GGTACTGAAG AGCTGATTGA TGGTCTTGGA AGCTCTTCAG 5761 TAATTGAGTT CCCAAGGGGG GTTGAGTCTG TAGAGCTTCC AGATGGCTCT GACTCAGTGA 5821 ATGAGCTACT TGACACCGAT AGTGCTGATT TTTCTTCCTC TAGGCTTGAA CTACTTATAG 5881 GTAATGGGAC AAGCCGTTTT GTGATGCCTG ACTTGGTCGA AACTCTAGGC CCAGACATGT 5941 TTTTTCCCAG TATCGACTCA GGCACGGTTA TACACCACCC TCAAGATAAT TATGTTCCTA 6001 TTATTCTGCC AGCTGCGGAT CTATTCCCAG CTTCTACTGT TATAAGTGTG GATGATGACT 6061 TTGCTGATTT TTATTTGCAC CCCAGTCTCC GTAAACGCAA ACGAAAATAT CGTATTTATT 6121 GATATTTTTC AGATGGCAAT GTGGACACCC CAGACCGGGA AGCTTTACCT CCCACCTACA 6181 ACTCCAGTGG CAAAAGTGCA GAGCACAGAC GAATATGTGT ACCCTACGTC TCTCTTCTGT 6241 CATGCACACA CGGACCGTTT GCTAACAGTG GGCCACCCTT TTTTTTCTGT CATTGACAAT 6301 GACAAGGTCA CTGTGCCTAA AGTGTCTGGC AACCAATATA GGGTTTTCAG ACTTAAATTC 6361 CCAGATCCAA ATAAATTTGC ATTGCCCCAA AAGGATTTCT ATGATCCTGA GAAAGAACGG 6421 TTAGTGTGGA GGTTAAGGGG TCTGGAAATT GGAAGAGGTG GCCCATTAGG GATTGGCACT 6481 ACCGGGCACC CCCTTTTTAA CAAGCTTGGA GACACGGAAA ATCCAAATAA ATATCAGCAA 6541 GGCTCTAAGG ATAATAGGCA GAACACTTCC ATGGACCCCA AACAAACACA GCTGTTTATT 6601 GTTGGCTGTG AACCCCCTAC AGGGGAACAC TGGGATGTAG CTAAGCCCTG TGGAGCTCTG 6661 GAGAAGGGTG ACTGCCCTCC TATCCAACTT GTAAATAGTG TAATTGAGGA TGGGGATATG 6721 TGTGACATTG GCTTTGGGAA TATGAACTTC AAAGAGCTGC AGCAGGATAG GAGTGGTGTG 6781 CCTCTTGATA TTGTATCTAC CCGGTGCAAA TGGCCCGACT TTCTGAAAAT GACCAATGAG 6841 GCATATGGGG ATAAGATGTT CTTCTTTGGA AGGAGAGAGC AAGTGTATGC AAGACACTTT 6901 TTCACCAGGA ATGGCTCTGT GGGGGAGCCC ATACCAAACT CTGTGAGTCC CAGTGACTTT 6961 TACTACGCAC CCGACAGCAC ACAGGACCAG AAGACACTCG CACCCTCCGT GTACTTTGGA 7021 ACTCCTAGTG GGTCACTTGT GTCGAGTGAT GGTCAGCTGT TTAACAGGCC ATTTTGGCTT 7081 CAAAGGGCTC AGGGAAACAA TAATGGTGTG TGCTGGCACA ATGAGCTCTT TGTTACTGTT 7141 GTCGACAACA CAAGGAATAC AAACTTTACT ATCTCCCAGC AAACCAACAC ACCAAACCCA 7201 GATACATATG ACTCTACTAA TTTTAAAAAC TATTTAAGAC ATGTGGAACA ATTTGAGCTG 7261 TCCCTTATTG CTCAACTGTG TAAGGTTCCA CTTGACCCGG GTGTGCTTGC CCATATAAAC 7321 ACTATGAACC CAACCATCTT GGAGAACTGG AACTTGGGTT TTGTACCTCC CCCACAGCAG 7381 TCCATCTCTG ATGACTATAG GTATATAACA TCATCGGCAA CTCGCTGTCC AGATCAGAAT 7441 CCGCCCAAGG AAAGAGAGGA TCCTTACAAG GGTCTTATAT TTTGGGAAGT TGATCTTACT 7501 GAGAGGTTTT CTCAGGACCT TGATCAGTTT GCTCTGGGAC GAAAGTTTCT GTATCAAGCT 7561 GGTATACGTA CTGCTGTTAC GGGCCGCGGG GTCAAAAGGG CAGCGTCTAC AACCTCTGCG 7621 TCTTCTAGAG ATGATTTCGA TTTTACCACA TTTGTAGAGG TTTTACTTGC TTTAAAAAAC 7681 CTCCCACACC TCCCCCTGAA CCTGAAACAT AAAATGAATG CAATTGTTGT TGTTCTCCCG 7741 GCGGATTTGT CCTACTCAGG AGAGCGTTCA CCGACAAACA ACAGATAAAA CGAAAGGCCC 7801 AGTCTTTCGA CTGAGCCTTT CGTTTTATTT GATGCCTGGC AGTTCCCTAC TCTCGCATGG 7861 GGAGACCCCA CACTACCATC GGCGCTACGG CGTTTCACTT CTGAGTTCGG CATGGGGTCA 7921 GGTGGGACCA CCGCGCTACT GCCGCCAGGC AAATTCTGTT TTATCAGACC GCTTCTGCGT 7981 TCTGATTTAA TCTGTATCAG GCTGAAAATC TTCTCTCATC CGCCAAAACA GCCAAGCTTC 8041 ATGTTGCTAA ACCAATGTTA AGTGAATCTT TGGAAACAAA ATGTTTCCAA ATTACTGGGA 8101 TGTGCATGTT GAAACGTGGG TTAATTAACT AGCCATGACC AAAATCCCTT AACGTGAGTT 8161 TTCGTTCCAC TGAGCGTCAG ACCCCGTAGA AAAGATCAAA GGATCTTCTT GAGATCCTTT 8221 TTTTCTGCGC GTAATCTGCT GCTTGCAAAC AAAAAAACCA CCGCTACCAG CGGTGGTTTG 8281 TTTGCCGGAT CAAGAGCTAC CAACTCTTTT TCCGAAGGTA ACTGGCTTCA GCAGAGCGCA 8341 GATACCAAAT ACTGTTCTTC TAGTGTAGCC GTAGTTAGGC CACCACTTCA AGAACTCTGT 8401 AGCACCGCCT ACATACCTCG CTCTGCTAAT CCTGTTACCA GTGGCTGCTG CCAGTGGCGA 8461 TAAGTCGTGT CTTACCGGGT TGGACTCAAG ACGATAGTTA CCGGATAAGG CGCAGCGGTC 8521 GGGCTGAACG GGGGGTTCGT GCACACAGCC CAGCTTGGAG CGAACGACCT ACACCGAACT 8581 GAGATACCTA CAGCGTGAGC TATGAGAAAG CGCCACGCTT CCCGAAGGGA GAAAGGCGGA 8641 CAGGTATCCG GTAAGCGGCA GGGTCGGAAC AGGAGAGCGC ACGAGGGAGC TTCCAGGGGG 8701 AAACGCCTGG TATCTTTATA GTCCTGTCGG GTTTCGCCAC CTCTGACTTG AGCGTCGATT 8761 TTTGTGATGC TCGTCAGGGG GGCGGAGCCT ATGGAAAAAC GCCAGCAACG CGGCCTTTTT 8821 ACGGTTCCTG GCCTTTTGCT GGCCTTTTGC TCACATGTTC TTAATTAAAT TTTTCAAAAG 8881 TAGTTGACAA TTAATCATCG GCATAGTATA TCGGCATAGT ATAATACGAC TCACTATAGG 8941 AGGGCCATCA TGGCCAAGTT GACCAGTGCT GTCCCAGTGC TCACAGCCAG GGATGTGGCT 9001 GGAGCTGTTG AGTTCTGGAC TGACAGGTTG GGGTTCTCCA GAGATTTTGT GGAGGATGAC 9061 TTTGCAGGTG TGGTCAGAGA TGATGTCACC CTGTTCATCT CAGCAGTCCA GGACCAGGTG 9121 GTGCCTGACA ACACCCTGGC TTGGGTGTGG GTGAGAGGAC TGGATGAGCT GTATGCTGAG 9181 TGGAGTGAGG TGGTCTCCAC CAACTTCAGG GATGCCAGTG GCCCTGCCAT GACAGAGATT 9241 GGAGAGCAGC CCTGGGGGAG AGAGTTTGCC CTGAGAGACC CAGCAGGCAA CTGTGTGCAC 9301 TTTGTGGCAG AGGAGCAGGA CTGAGGATAA GAATTGTAAC AAAAAACCCC GCCCCGGCGG 9361 GGTTTTTTGT TAATTAA //