LOCUS pAsylum_w:7.6kb_ 8798 bp DNA circular SYN 19-May-2017 DEFINITION - ACCESSION - KEYWORDS - SOURCE - FEATURES Location/Qualifiers source 1..48 /note="SV40 enhancer (fragment)" source complement(7092..7155) /note="SV40 pA (fragment)" source 7461..7549 /note="hEF1a polyA signal (fragment)" primer_bind 24..45 /note="Asylum-R primer" intron complement(<128..189) /note="intron (compare to Wen GenBank) [Split]" intron complement(239..606) /note="intron discovered by Sanger of RCA" primer_bind complement(957..975) /note="AdO27R primer" CDS 984..3668 /note="Large T" unsure 1086..1250 /note="Structural homology to DNAJ" misc_binding 1149..1166 /note="DNAJ (HPDRVS)" misc_difference complement(1155..1156) /note="A deleted between these bases" misc_difference complement(1206) /note="T->G" CDS 1228..1389 /note="ALTOa" CDS 1423..1803 /note="ALTO" unsure 2589..3236 /note="Helicase conserved core" misc_difference complement(3460) /note="T->G in Wen GenBank" misc_difference complement(3460) /note="G->T" primer_bind 4009..4027 /note="AdO11288L primer" misc_difference complement(4081..4082) /note="TC deleted between these bases" misc_difference complement(4081..4082) /note="TC inserted between these two bases in Wen GenBank" misc_difference complement(4143..4144) /note="TGACTGTTT inserted between these two bases in Wen GenBank" CDS complement(4207..4332) /note="RBB, Cys-rich, no good way to translate" misc_binding complement(4225..4239) /note="LXCXD" CDS complement(4506..>7088) /note="EO2-4 [Split]" primer_bind complement(4897..4915) /note="AdO10409R primer" misc_difference complement(6501) /note="inserted A" misc_difference complement(6501) /note="This A deleted in Wen GenBank" intron complement(6598..>7088) /note="Minor-class intron (compare to Wen GenBank) [Split]" primer_bind complement(7110..7131) /note="Asylum-L primer" rRNA complement(7253..7372) /note="5S rRNA fragment (rrnB operon)" rep_origin 7550..8283 /note="MB1 Ori" CDS 8371..8745 /note="Zeo" BASE COUNT 2364 A 1998 C 2157 G 2279 T 0 OTHER ORIGIN ? 1 CCCTGCAGGG CCTGAAATAA CCTCTGAAAG AGGAACTTGG TTAGGTACGC AACTGTTGGG 61 AAGGGCGATC GGTGCGGGCC TCTTCGCTAT TACGCCAGCC CGGATCCTTA TCGATGAGAC 121 CGGTTCTGAA TTCCCCTAAG TGAAAAGTCC TTAAGCTGTC AAAATGACAA AGTGAAAGAG 181 AAAACTTACT GTGAATGTTG CCAAGTAGTA TTATTTTTTG GCTTTCAGTA GAGCATCACT 241 TAAGGAGAAT CCTAGAAAGT ATGTAAATAA CAGAAAATAA AAGAATTTAG GCTTTGTAAA 301 TGGCCTAAAA GGAAAGTGCA TGCAAAGGAC AGAAAAGGAG CATTTTTTAA AAATATAAGC 361 CACGCCCCCA TAATTAGCAT ATTAACCGTC ACTTTTTTAA ATAAAAATAA ACTTTTAATG 421 TTAAAAAATT CAAAAACTAA TGCATGAATT AAAAGTCATT TTTTATGCTT TTTACCATCT 481 GCAGTGTACA CAACAATAAC ATTAGCTAAA TCAAATAAAA ACATACCAAC AACAATTAAA 541 ACACATAAAT AATATTTAAA TACACATTTT AAAGCATTAA AGAGTAGAAA GAAAATTTAT 601 TCCTACCTCT TTTGCACAAA ATGTTCTTAT GAGCTTGCAG TGAGAAAACA GGAAATGTGG 661 CAGGGTGGAG TATCACATTA CCAAATTCCA AAGTGAGTCA CCTAGTGGTC ACCAAGTAAA 721 CAAAGGAAAC AGATGGCCTT CCCTCCCTTT TTTTCTTTGT AAAGAAAAGA ACACCATCAG 781 CCTTGGCCTA AAACTGTATA ATAAAAGTAG GCAGGCAACT CAGGCCACTT CCAAACATGG 841 ATGTGCTCTT CTCCCATAGG TTGGCATTTT TCCTTGATGT CTCCCTGTCA CGTACCGGGC 901 TGCAAATCAG GATGAGGATT CAAGGCCCTA TATAAGAATG GTGAGTTTTT TTATTTCTGT 961 CCATTCTGCA CTGAAAAGGC ACAATGAGCA GCAACTTAGA AAATTCTGGT GATAGATATG 1021 TCAGGGCCAA TAGGCAGGAG AAAAAGAATT ATCTTTTAGC CTGCCTCAGA GGTCATGGGA 1081 TACCTTGTGA CCCTGGAATG AATAAGGAAG AGCTTAAGAA AACTGTGAAA AAAGTACTAA 1141 TACTAAATCA TCCTGACAGG GTTTCAAGTG GAACTGCAAC CCTATCTGAT GATGAATTAA 1201 AAACGCTGAC TGGAGCACTG CAAGCCTATG AGACGACATT TGACCCCAAC TACTGCGGCC 1261 TCACGGACTC TATCTCTCTG CAAGATGAAC CACCACCACG TGAGCACCGT GATGATGCAC 1321 CTGGAGAAAA CGCAAGACAG GCCCTGCTTC ATATCCTTCC CCATGTGGAT TCCTCCCTCT 1381 CCCAGGTAGA TTTTGTGAGT GCTGTGAAGG ATGCTATAGC TAATGACCAC AAGAAGGCCA 1441 GAAAACTGCG CCGCCTACTG GAGCAATATG AGACTGACGT TGCAGGGGAC GATTCTGAAT 1501 CTGAATCTAG TGCAAGTGAT GGAAGTTCAC CTAGGAGGTC GTTGTTTGAT GACCTGTTTG 1561 AAAGAGAGGA GGAGGACTCT TATGAAAGCC CACCGACCAG CCCCTTGCCC ATTGTTGACC 1621 TTACGGGATC CTCTGATGAG GAGGGTCCAA CCTCAAGGAA ACGGGTCAAT TCAGATGGGG 1681 AAGGGGAGGA GATACCCAGA AGAAGAGCAA GGAGGTTGTC AGAGGACCAG GAAGGGGAGG 1741 GGCCTTCAGC CGTTAGTGAC GTGGAGGAGG AGGCGTGGCC GGAAGAGGAT GAGGAGCCAA 1801 TGAGCTCTTA CCAGCCCCAT TCTCCAACCC CGCCTTCTTC ACCGGAGCCA ATGAGCAGTG 1861 GGTTTGCGAG ACCTTGGCCC ACATCCCCAT CCCTGCCTCC TTCTCCCCAG CCCATAAGGA 1921 GTGGTTCAGG GAGACCTCCC TCAGACTACT TCTCAGCCAG CCAAGCATCA CAACCTGCAA 1981 CTGGGACATC TCAGCCAACA CCTGAAAAGG GACTGCCACC TGAGATTCCA CCTTTGTTTC 2041 AGGACTTTTT GAGTAAGGCT TTGAACACAC ACAGCACTGT TCATTGTTTT CTGTTGTTTT 2101 ATTCCAGGTG CAAATACGAT GTTGTACAGG CTGCATTGGG AAGTGTGGGG GATGTGGAGG 2161 GTACTGTGAC AGGCTGTTAT GAAGAGTATG ATAACAACAT GTTTGTACAA CTTGTGCGAT 2221 TTCAAAGTCC TCATAGGCAA ACTAGGCTTC GTAATGTGCT TAAACCTTTG TTTACATCTG 2281 TCAATCACTG CCTGGTACGG GTTGTTCTTG CCAAGAAGTG GGCCCATTCG GTTCACAAAC 2341 TGAGGTTAAG GTGTCAGCCC GTGCATGATC GCTGTAATCA GCCATCCATT GCTGAGTCTC 2401 ATGAATTTAA CGACAGTGAG GGTGATGCTA ACGAGAATGC ATTCAGCATT AAGTTGTTAA 2461 ACGAGTTTGC TATGGTGTTT GGGTACACCG ACTGTCTGGC TGTCATAGGA AACTATGATA 2521 AATTGGCAAT CAAACCTGAC GACTGCTCTA GATGTGTAGA ACCCTCACAG GAGGACGTCA 2581 GGAACCCAGA CAGTCATTTC AATTTACATC AAACCCATTT CAACAACGCG CAGCTATTTC 2641 AGCTGCAAAA GGACAAGAAA CGCCTAGCTG GCAATGCGAC TGTAACAGTG ATGGCGCATC 2701 AAAGGTTGAA ATACCAAACA ATAACTGAGC AGGACTTTTA CATGGAAAGA TTGTCTGAAA 2761 TCCTAGATGA CCTTTTGAAG GACAGCACGA ACCTATTTGA GCTTTACATT GCACAGCTGG 2821 CAGTGCAGCA AATACTCGGT TGGCAAGTGG ATGTCTTTCT CCGTGCAGTT CACAAGGCCC 2881 TCATAATTGG TGAGCCAAAA ACGCGGTATG TAATTTTCAA AGGGCCATAC AACAGCGGGA 2941 AAACAACCCT TGCTGCCAGT GTAGCCAATT GGCTACAGGG ATGCACGTTA AACGTGAACA 3001 TACCTGCTGA AAAATTACCG TTCGAATTGG GACGGGCCAT TGGCCGACGA ATGGTGATAT 3061 TTGAGGACGT GAAGGGGAAA CCTGAGTCTG AGGAGGACGA CCTCACCACT GGCTTTGGCT 3121 TTACTAGGCT AGATGACCAC CGTGATTACT TGGATGGTCA TGTGAAAGTC GGCCTTGAGA 3181 AAAAACACCA GGACAAGGTA GAACAGGTTT TTCCTGCTGG CATTATTACA ATGAACAATT 3241 ATGTTATTCC TTCTGCAATT AGGGCTCGTG TGTCGAGAAT ATTCACCTTT ACATCTAACC 3301 CAAGGGTTCG CGGGCTAATG AACAAGTACT CCATATCCGC CCGCCTACTC ACAGACCCCC 3361 GGGTTCTCGT CTTCTCAGCG GTGGCTAGCT CGCTGACGAC TTTGGATAGT GCAACGGGGC 3421 TGTCTATGTT TCAGCCTCCG TTTTGGCCAG CAAAGGATGA CCCCAGGTTC AGCGACAGGC 3481 TGGACCTGCT AGCCGCAAGA ATGTTTGCCC TAGATACAGA CGCAGTTGAC CAGCATTTGG 3541 AAAGCATGGA CTCAGCATTT GGTCCACCCG AGCCAATAGT GAAGTTGCTC ACCGAGGATA 3601 AGCCCGCTTC TAGGCGTCTT GACAGGGTAC GCCAGGCATT GATTGACGGA CGCAATAATA 3661 ACTCATAATA ACTAACGGTG CTCTGCTTTT ATGTGAAGGG GTATGCAGTT CCCATTATTT 3721 AATGTTATGT ATTTATTAAC CAGCCAACTT AGACTATACT AACAATCAAT GTATTACTTG 3781 AAGTATTTAT GGGTGCTTGT ATTCTGTGCT AAATGCGTGT CTAATAACCA CAAACCATAT 3841 TTAGGGCCAC CATGTCTCCG CGTGCCAAGT CTCTGGGAAA TCAGACCAAG ATTACAGCAT 3901 ACATGCATGC TGTAAAGAGA CGTTGGGAAG CACCATACAT TCCTATACGG AGATGCAGGA 3961 CAACAGCTAG AATGTGGAAA GTTGAGCAAA GGCCCCTGAT GTCTGTGCGC TACGATGAGG 4021 TGATACGACA TCAAGACAAC GTCAATGACA ATGAGGACAA TGTTGATGTT CACAGTGAAG 4081 ACAATGTTGA TGTTGACAAT GAAGACAATG TTGATGTTCA ATAAAATTCT TTATTTCAAG 4141 TCATGTCTGT GTAAGCATTG ACATTATTTT CCAGGAATCA GGCATAAATA ACAAACACCA 4201 CAATGATTAA TTCAGTTGTA ATACATCACA ACAGTACAGT CCTTCAGTAA CATCTTCTAA 4261 GTACATATAT TCTAAGTAGT TGAGCATTAA AATACTGACA TCCTTCACCA GACAATCACA 4321 TAATAAACAT TTCTAAGTTT TTTGCATAAT ATACCTTCAT ACCCTTAACC ATTTATGTTC 4381 TAAGTAAGTG CAATCACAAT AGTCTAAAGA TTAATACTTA TACCTTGAAT GGCATGTCCC 4441 AGGTCCAATA GTGTAAAACA AAAAAAGGGT CTTTGGTTTA CTCATAAAAG TCAAAATAAA 4501 AAAAATCATT GGTCAGTTGG AGGCCGTGGC GGTGTCCGAA ACAGGTCGTA CCCCGCATCA 4561 CTTTCCTCAG CATCGGTTTG GAAGCTTGGT GCTTGTGGCA CTGAATCAGT GTCACTAAAG 4621 GTAGTTGAGG CGGACTCAAG TGATTCGTCG TCGGCCGTTA ACCCCCCATC AGAATCTGAC 4681 TGTGACACCT GAAATACGTA CCCACCCACT TGTAATGTGC GTGGCTGGAA CTGCACTGGT 4741 TCCTGCGGTG GGGGTGGGGT CCTCGGTACT GGACTTCCAT TAACGGACAT TGGGCGGGGG 4801 GAATGAGGTC TGGAAACGGG GCGTGGTGGT GTGGTGTCCT GCATAGGAGG GGCTACATTA 4861 TTGAATAACA TAGCTAACTC ACTCATATCA GACGCGGGGC TGTGGTTTGG TGACGCAGGG 4921 GATAGGCCAC CTGGCAACTC AACTGCGGCA GGGCTGCTGC TGCTACCTGA GGATACAATG 4981 TCTTGTGGCG AGCGGAACCC ACCAGGTTCA GACCGCATGA CTGGATAGAA CACGTGCTCC 5041 GGTCTGTAAA ACGGGTTTGT AGCTCGTGAC AAGCGCTCAT GGTTGAAAGA CATGACAATA 5101 GCATTCTCAA GGACATCCCT GTCCTGCACG GTAATACCTT CAAATAGACC ATCAACGACC 5161 CGAGCAGTTA GCCCTTCCCT TTCATCAAAC CGGTCTTGTA GACGTGTGCG AACAGATGCC 5221 ATACGCTCAC GAGATATGCG TTTTTGTCTA CGCCTCAGCA TAAGCGGTGA TGTGCTCTTA 5281 CCGGACCGAT AGGTACCAGT CGACTCTTGT GTGCGAGTGC GAGGCTCTGC ATATTGAGCT 5341 TTAATAGTTT CGGGTGCAAT ACAACAAGAC ATCAGCGCTT CGTCCTCCGA CACACTAGAT 5401 GGGTCTATTA CCTCGCCTGT AACTCCAGTC TCCTCCAGCA GTTTCTGATA CTGTGACGGT 5461 TCTGGTTTAG GTACAGTCAC GTTGCCAGAC ATCTCCTCTA CACGGATATG TTTCAAAAGG 5521 CGCTGCACGT AATCGCGTTC GGGATCCACG TTGGGAAACG ACATGTCAGT GTGTATGGAT 5581 TGCCCCGCCC ACAAGCTCTC GCTGTCCTCA GAGCGATTTC CAGCAATAAT ACGCTTAAGT 5641 AGCTGCACAC TGTACTGATG GGTCGTCATG GTTACGTTAC CGATGCGCTC GTAGTTCCGG 5701 AAATGAGGCC TGAATGACAT GCTGTATGTT TGATGTTTGT TAGAATGGGA CCGCATGTGC 5761 AAGGACACTT CGGGTTCACT CGGGCAGGTC ACTGTGTCAT CGCAATGCAT GTCGCTCAGA 5821 TTCATGCTGG GAGTGAGTGC GCACTTTAAC TGATGGAAAT GACCTGCGTC TGCCTTTGTG 5881 CTCAGAAAAC AACTGTCCAC TGATCGCACT GAGGCCGGTT TGAATATACG CCGCCGTTTG 5941 GAAAAGGGTT CTGGGTTGCA GTCAATGTCA GCATCATAGC CTGCATCGGT CTTGTAGAAC 6001 GCTTGCTGCG GCCAGTGTGG AAGCATTGGG GGTTCTACAA TTCTTTCGCT GTAATGCTGT 6061 CTGTGTGCGT CTGCGCGTCT TGACCGTTTA GGAGCTTGGA TCCTGTGCCT TAATGTCCTA 6121 ATGCGGTTCA CCCTGTAGCG GTACGCAGAC GCCGTGTGTT TTTGCAGTGG TTTAAATTTA 6181 GTTTGCACTC CATACACAGG TGACACTGTT GTTTCGGTGG TCCCTAGGCG AATGTACTGA 6241 GTTATCGTGC CTTGATTTCT GGACGGTCCT GGCGTGTGCA CTACCGTCAG AACTAAAGGT 6301 CCTCGCCCGC CTGGGTTAGT TGTTAATTGA ATGTGGTCTA TACTAGGCCC TCTGCAATAA 6361 TCGTCTGAAT CTGGCGAGTA GTACTCACTT GTAGTGTCGC TTGTGTCAGT GTAGTCATCT 6421 CCAGAGGACA TACCCAGCGG AGCTTGTTGA CTACGTAACC CCTGCGTCTC CACCATTCTG 6481 CGATGCAATT GCTGTTCCAT TATGTGATAC CCGTCATCAG GCAGTTCCTG CAGTGCTCGT 6541 GTCTCCTGCG TTGTTGCTAA AGCCTGCCGA AGTGGAATGG GTGGCCTAAT AGCGAAACTG 6601 CGAAACATAC GTGAGCGAAA TAAGGGGAGG AAAGGGCCTT CGTTCATATC AGGCACTATT 6661 TTGCGAAATA GAAAGGTGGG TTGATTTTCC GGATCTTCCT CAAAAGCAAC AGCCCAGTTG 6721 TTCGTAAGAA CGCAGTCATC CGCGCTGGCT ACTATAGCTC GCATATACCT GCTACTCAGC 6781 CGAATAGGTG TTGGATAGTC TGTATCCACA AAGTAACTAA GCAAAATCCC TATAACAGCG 6841 TCGCGCAGCG TGTTATCGTT CGGGCCATCG CACGGCATGA AGTGTCTGTT CTTCTGTTTG 6901 AAAATTGAGC CAAAGTGTGT GGGCCTGTAC GGGTTGACCT GCAGGCTCAT GATTGTCTGT 6961 CGCAAAACCA TAGACAAACG CTTAAAGGCT AGATAACGGT CATACTTAGT GTAGTGGTAG 7021 TTTAGGTGAT ATGTCTGCAT GTCAAACACC ATATTGCGAC TTTGCCCGGC TAGGAAGGTT 7081 TCAACGTTCA GTTTAAAAAA CCTCCCACAC CTCCCCCTGA ACCTGAAACA TAAAATGAAT 7141 GCAATTGTTG TTGTTCTCCC GGCGGATTTG TCCTACTCAG GAGAGCGTTC ACCGACAAAC 7201 AACAGATAAA ACGAAAGGCC CAGTCTTTCG ACTGAGCCTT TCGTTTTATT TGATGCCTGG 7261 CAGTTCCCTA CTCTCGCATG GGGAGACCCC ACACTACCAT CGGCGCTACG GCGTTTCACT 7321 TCTGAGTTCG GCATGGGGTC AGGTGGGACC ACCGCGCTAC TGCCGCCAGG CAAATTCTGT 7381 TTTATCAGAC CGCTTCTGCG TTCTGATTTA ATCTGTATCA GGCTGAAAAT CTTCTCTCAT 7441 CCGCCAAAAC AGCCAAGCTT CATGTTGCTA AACCAATGTT AAGTGAATCT TTGGAAACAA 7501 AATGTTTCCA AATTACTGGG ATGTGCATGT TGAAACGTGG GTTAATTAAC TAGCCATGAC 7561 CAAAATCCCT TAACGTGAGT TTTCGTTCCA CTGAGCGTCA GACCCCGTAG AAAAGATCAA 7621 AGGATCTTCT TGAGATCCTT TTTTTCTGCG CGTAATCTGC TGCTTGCAAA CAAAAAAACC 7681 ACCGCTACCA GCGGTGGTTT GTTTGCCGGA TCAAGAGCTA CCAACTCTTT TTCCGAAGGT 7741 AACTGGCTTC AGCAGAGCGC AGATACCAAA TACTGTTCTT CTAGTGTAGC CGTAGTTAGG 7801 CCACCACTTC AAGAACTCTG TAGCACCGCC TACATACCTC GCTCTGCTAA TCCTGTTACC 7861 AGTGGCTGCT GCCAGTGGCG ATAAGTCGTG TCTTACCGGG TTGGACTCAA GACGATAGTT 7921 ACCGGATAAG GCGCAGCGGT CGGGCTGAAC GGGGGGTTCG TGCACACAGC CCAGCTTGGA 7981 GCGAACGACC TACACCGAAC TGAGATACCT ACAGCGTGAG CTATGAGAAA GCGCCACGCT 8041 TCCCGAAGGG AGAAAGGCGG ACAGGTATCC GGTAAGCGGC AGGGTCGGAA CAGGAGAGCG 8101 CACGAGGGAG CTTCCAGGGG GAAACGCCTG GTATCTTTAT AGTCCTGTCG GGTTTCGCCA 8161 CCTCTGACTT GAGCGTCGAT TTTTGTGATG CTCGTCAGGG GGGCGGAGCC TATGGAAAAA 8221 CGCCAGCAAC GCGGCCTTTT TACGGTTCCT GGCCTTTTGC TGGCCTTTTG CTCACATGTT 8281 CTTAATTAAA TTTTTCAAAA GTAGTTGACA ATTAATCATC GGCATAGTAT ATCGGCATAG 8341 TATAATACGA CTCACTATAG GAGGGCCATC ATGGCCAAGT TGACCAGTGC TGTCCCAGTG 8401 CTCACAGCCA GGGATGTGGC TGGAGCTGTT GAGTTCTGGA CTGACAGGTT GGGGTTCTCC 8461 AGAGATTTTG TGGAGGATGA CTTTGCAGGT GTGGTCAGAG ATGATGTCAC CCTGTTCATC 8521 TCAGCAGTCC AGGACCAGGT GGTGCCTGAC AACACCCTGG CTTGGGTGTG GGTGAGAGGA 8581 CTGGATGAGC TGTATGCTGA GTGGAGTGAG GTGGTCTCCA CCAACTTCAG GGATGCCAGT 8641 GGCCCTGCCA TGACAGAGAT TGGAGAGCAG CCCTGGGGGA GAGAGTTTGC CCTGAGAGAC 8701 CCAGCAGGCA ACTGTGTGCA CTTTGTGGCA GAGGAGCAGG ACTGAGGATA AGAATTGTAA 8761 CAAAAAACCC CGCCCCGGCG GGGTTTTTTG TTAATTAA //