LOCUS PHGLUC.GB MAY 4463 BP DS-DNA CIRCULAR SYN 17-MAY-2003 DEFINITION - ACCESSION - KEYWORDS - SOURCE - FEATURES Location/Qualifiers misc_RNA complement(>4..12) /note="SV40 minor late 19S RNA" promoter <4..>348 /note="SV40 promoter (∆SELP)" enhancer 26..168 /note="SV40 enhancer elements" misc_feature 173..236 /note="SV40 21bp repeats" rep_origin 193..>328 /note="SV40 Ori" mRNA 242..248 /note="early-late transcription startpoints" mutation 262..262 /note="G->A kills SELP ATG" mRNA 282..288 /note="early-early transcription start points" CDS 373..1092 /note="EGFP" polyA_signal 1108..>1329 /note="SV40 Late PolyA" mutation 1399..1399 /note="missing A" promoter <1420..1657 /note="hEF1alpha promoter core" 5'UTR 1665..1952 /note="HTLV R-U5 leader" CDS 1969..2526 /note="Gaussia Luciferase" misc_signal 1969..2016 /note="ER signal (Remy06)" polyA_signal <2552..3214 /note="hEF1a polyA signal" rep_origin 3215..3948 /note="MB1 Ori" promoter 3949..4035 /note="EM7 promoter" CDS 4036..4410 /note="ShBle (ZeoR)" terminator 4411..4463 /note="terminator (rpmB/G)" BASE COUNT 1087 A 1151 C 1211 G 1014 T 0 OTHER ORIGIN - 1 CCCCTGTGGA ATGTGTGTCA GTTAGGGTGT GGAAAGTCCC CAGGCTCCCC AGCAGGCAGA 61 AGTATGCAAA GCATGCATCT CAATTAGTCA GCAACCAGGT GTGGAAAGTC CCCAGGCTCC 121 CCAGCAGGCA GAAGTATGCA AAGCATGCAT CTCAATTAGT CAGCAACCAT AGTCCCGCCC 181 CTAACTCCGC CCATCCCGCC CCTAACTCCG CCCAGTTCCG CCCATTCTCC GCCCCATGGC 241 TGACTAATTT TTTTTATTTA TACAGAGGCC GAGGCCGCCT CGGCCTCTGA GCTATTCCAG 301 AAGTAGTGAG GAGGCTTTTT TGGAGGCCTA GGCTTTTGCA AAAAGCTTGA TTGGGATCCA 361 CCGGTCGCCA CCATGGTGAG CAAGGGCGAG GAGCTGTTCA CCGGGGTGGT GCCCATCCTG 421 GTCGAGCTGG ACGGCGACGT AAACGGCCAC AAGTTCAGCG TGTCCGGCGA GGGCGAGGGC 481 GATGCCACCT ACGGCAAGCT GACCCTGAAG TTCATCTGCA CCACCGGCAA GCTGCCCGTG 541 CCCTGGCCCA CCCTCGTGAC CACCCTGACC TACGGCGTGC AGTGCTTCAG CCGCTACCCC 601 GACCACATGA AGCAGCACGA CTTCTTCAAG TCCGCCATGC CCGAAGGCTA CGTCCAGGAG 661 CGCACCATCT TCTTCAAGGA CGACGGCAAC TACAAGACCC GCGCCGAGGT GAAGTTCGAG 721 GGCGACACCC TGGTGAACCG CATCGAGCTG AAGGGCATCG ACTTCAAGGA GGACGGCAAC 781 ATCCTGGGGC ACAAGCTGGA GTACAACTAC AACAGCCACA ACGTCTATAT CATGGCCGAC 841 AAGCAGAAGA ACGGCATCAA GGTGAACTTC AAGATCCGCC ACAACATCGA GGACGGCAGC 901 GTGCAGCTCG CCGACCACTA CCAGCAGAAC ACCCCCATCG GCGACGGCCC CGTGCTGCTG 961 CCCGACAACC ACTACCTGAG CACCCAGTCC GCCCTGAGCA AAGACCCCAA CGAGAAGCGC 1021 GATCACATGG TCCTGCTGGA GTTCGTGACC GCCGCCGGGA TCACTCTCGG CATGGACGAG 1081 CTGTACAAGT AAAGCGGCCG CTTCGAGCAG ACATGATAAG ATACATTGAT GAGTTTGGAC 1141 AAACCACAAC TAGAATGCAG TGAAAAAAAT GCTTTATTTG TGAAATTTGT GATGCTATTG 1201 CTTTATTTGT AACCATTATA AGCTGCAATA AACAAGTTAA CAACAACAAT TGCATTCATT 1261 TTATGTTTCA GGTTCAGGGG GAGGTGTGGG AGGTTTTTTA AAGCAAGTAA AACCTCTACA 1321 AATGTGGTAA AATCGATAAG GATCCGGGCT GGCGTAATAG CGAAGAGGCC CGCACCGATC 1381 GCCCTTCCCA ACAGTTGCGG TGGAGAAGAG CATGCGTGAG GCTCCGGTGC CCGTCAGTGG 1441 GCAGAGCGCA CATCGCCCAC AGTCCCCGAG AAGTTGGGGG GAGGGGTCGG CAATTGAACC 1501 GGTGCCTAGA GAAGGTGGCG CGGGGTAAAC TGGGAAAGTG ATGTCGTGTA CTGGCTCCGC 1561 CTTTTTCCCG AGGGTGGGGG AGAACCGTAT ATAAGTGCAG TAGTCGCCGT GAACGTTCTT 1621 TTTCGCAACG GGTTTGCCGC CAGAACACAG CTGAAGCTTC GAGGGGCTCG CATCTCTCCT 1681 TCACGCGCCC GCCGCCCTAC CTGAGGCCGC CATCCACGCC GGTTGAGTCG CGTTCTGCCG 1741 CCTCCCGCCT GTGGTGCCTC CTGAACTGCG TCCGCCGTCT AGGTAAGTTT AAAGCTCAGG 1801 TCGAGACCGG GCCTTTGTCC GGCGCTCCCT TGGAGCCTAC CTAGACTCAG CCGGCTCTCC 1861 ACGCTTTGCC TGACCCTGCT TGCTCAACTC TACGTCTTTG TTTCGTTTTC TGTTCTGCGC 1921 CGTTACAGAT CCAAGCTGTG ACCGGCGCCT ACCTCGGATC CAGCCACCAT GGGAGTCAAA 1981 GTTCTGTTTG CCCTGATCTG CATCGCTGTG GCCGAGGCCA AGCCCACCGA GAACAACGAA 2041 GACTTCAACA TCGTGGCCGT GGCCAGCAAC TTCGCGACCA CGGATCTCGA TGCTGACCGC 2101 GGGAAGTTGC CCGGCAAGAA GCTGCCGCTG GAGGTGCTCA AAGAGATGGA AGCCAATGCC 2161 CGGAAAGCTG GCTGCACCAG GGGCTGTCTG ATCTGCCTGT CCCACATCAA GTGCACGCCC 2221 AAGATGAAGA AGTTCATCCC AGGACGCTGC CACACCTACG AAGGCGACAA AGAGTCCGCA 2281 CAGGGCGGCA TAGGCGAGGC GATCGTCGAC ATTCCTGAGA TTCCTGGGTT CAAGGACTTG 2341 GAGCCCATGG AGCAGTTCAT CGCACAGGTC GATCTGTGTG TGGACTGCAC AACTGGCTGC 2401 CTCAAAGGGC TTGCCAACGT GCAGTGTTCT GACCTGCTCA AGAAGTGGCT GCCGCAACGC 2461 TGTGCGACCT TTGCCAGCAA GATCCAGGGC CAGGTGGACA AGATCAAGGG GGCCGGTGGT 2521 GACTAAGCGG CCGCTCGAGC ATGCATCTAG CATTATCCCT AATACCTGCC ACCCCACTCT 2581 TAATCAGTGG TGGAAGAACG GTCTCAGAAC TGTTTGTTTC AATTGGCCAT TTAAGTTTAG 2641 TAGTAAAAGA CTGGTTAATG ATAACAATGC ATCGTAAAAC CTTCAGAAGG AAAGGAGAAT 2701 GTTTTGTGGA CCACTTTGGT TTTCTTTTTT GCGTGTGGCA GTTTTAAGTT ATTAGTTTTT 2761 AAAATCAGTA CTTTTTAATG GAAACAACTT GACCAAAAAT TTGTCACAGA ATTTTGAGAC 2821 CCATTAAAAA AGTTAAATGA GAAACCTGTG TGTTCCTTTG GTCAACACCG AGACATTTAG 2881 GTGAAAGACA TCTAATTCTG GTTTTACGAA TCTGGAAACT TCTTGAAAAT GTAATTCTTG 2941 AGTTAACACT TCTGGGTGGA GAATAGGGTT GTTTTCCCCC CACATAATTG GAAGGGGAAG 3001 GAATATCATT TAAAGCTATG GGAGGGTTTC TTTGATTACA ACACTGGAGA GAAATGCAGC 3061 ATGTTGCTGA TTGCCTGTCA CTAAAACAGG CCAAAAACTG AGTCCTTGGG TTGCATAGAA 3121 AGCTTCATGT TGCTAAACCA ATGTTAAGTG AATCTTTGGA AACAAAATGT TTCCAAATTA 3181 CTGGGATGTG CATGTTGAAA CGTGGGTTAA TTAACTAGCC ATGACCAAAA TCCCTTAACG 3241 TGAGTTTTCG TTCCACTGAG CGTCAGACCC CGTAGAAAAG ATCAAAGGAT CTTCTTGAGA 3301 TCCTTTTTTT CTGCGCGTAA TCTGCTGCTT GCAAACAAAA AAACCACCGC TACCAGCGGT 3361 GGTTTGTTTG CCGGATCAAG AGCTACCAAC TCTTTTTCCG AAGGTAACTG GCTTCAGCAG 3421 AGCGCAGATA CCAAATACTG TTCTTCTAGT GTAGCCGTAG TTAGGCCACC ACTTCAAGAA 3481 CTCTGTAGCA CCGCCTACAT ACCTCGCTCT GCTAATCCTG TTACCAGTGG CTGCTGCCAG 3541 TGGCGATAAG TCGTGTCTTA CCGGGTTGGA CTCAAGACGA TAGTTACCGG ATAAGGCGCA 3601 GCGGTCGGGC TGAACGGGGG GTTCGTGCAC ACAGCCCAGC TTGGAGCGAA CGACCTACAC 3661 CGAACTGAGA TACCTACAGC GTGAGCTATG AGAAAGCGCC ACGCTTCCCG AAGGGAGAAA 3721 GGCGGACAGG TATCCGGTAA GCGGCAGGGT CGGAACAGGA GAGCGCACGA GGGAGCTTCC 3781 AGGGGGAAAC GCCTGGTATC TTTATAGTCC TGTCGGGTTT CGCCACCTCT GACTTGAGCG 3841 TCGATTTTTG TGATGCTCGT CAGGGGGGCG GAGCCTATGG AAAAACGCCA GCAACGCGGC 3901 CTTTTTACGG TTCCTGGCCT TTTGCTGGCC TTTTGCTCAC ATGTTCTTAA TTAAATTTTT 3961 CAAAAGTAGT TGACAATTAA TCATCGGCAT AGTATATCGG CATAGTATAA TACGACTCAC 4021 TATAGGAGGG CCATCATGGC CAAGTTGACC AGTGCTGTCC CAGTGCTCAC AGCCAGGGAT 4081 GTGGCTGGAG CTGTTGAGTT CTGGACTGAC AGGTTGGGGT TCTCCAGAGA TTTTGTGGAG 4141 GATGACTTTG CAGGTGTGGT CAGAGATGAT GTCACCCTGT TCATCTCAGC AGTCCAGGAC 4201 CAGGTGGTGC CTGACAACAC CCTGGCTTGG GTGTGGGTGA GAGGACTGGA TGAGCTGTAT 4261 GCTGAGTGGA GTGAGGTGGT CTCCACCAAC TTCAGGGATG CCAGTGGCCC TGCCATGACA 4321 GAGATTGGAG AGCAGCCCTG GGGGAGAGAG TTTGCCCTGA GAGACCCAGC AGGCAACTGT 4381 GTGCACTTTG TGGCAGAGGA GCAGGACTGA GGATAAGAAT TGTAACAAAA AACCCCGCCC 4441 CGGCGGGGTT TTTTGTTAAT TAA //