LOCUS PBPVL1-GFP 5415 BP DS-DNA CIRCULAR SYN 17-MAY-2003 DEFINITION - ACCESSION - KEYWORDS - SOURCE - FEATURES Location/Qualifiers misc_RNA complement(>4..12) /note="SV40 minor late 19S RNA" promoter <4..>348 /note="SV40 promoter (∆SELP)" enhancer 26..168 /note="SV40 enhancer elements" misc_feature 173..236 /note="SV40 21bp repeats" rep_origin 193..>328 /note="SV40 Ori" mRNA 242..248 /note="early-late transcription startpoints" mutation 262..262 /note="G->A kills SELP ATG" mRNA 282..288 /note="early-early transcription start points" CDS 373..1092 /note="EGFP" polyA_signal 1108..>1329 /note="SV40 Late PolyA" promoter <1421..1658 /note="hEF1alpha promoter core" 5'UTR 1666..1953 /note="HTLV R-U5 leader" CDS 2007..>3495 /note="BPV1 L1" polyA_signal <3504..4166 /note="hEF1a polyA signal" rep_origin 4167..4900 /note="MB1 Ori" promoter 4901..4987 /note="EM7 promoter" CDS 4988..5362 /note="ShBle (ZeoR)" terminator 5363..5415 /note="terminator (rpmB/G)" BASE COUNT 1346 A 1489 C 1418 G 1162 T 0 OTHER ORIGIN - 1 CCCCTGTGGA ATGTGTGTCA GTTAGGGTGT GGAAAGTCCC CAGGCTCCCC AGCAGGCAGA 61 AGTATGCAAA GCATGCATCT CAATTAGTCA GCAACCAGGT GTGGAAAGTC CCCAGGCTCC 121 CCAGCAGGCA GAAGTATGCA AAGCATGCAT CTCAATTAGT CAGCAACCAT AGTCCCGCCC 181 CTAACTCCGC CCATCCCGCC CCTAACTCCG CCCAGTTCCG CCCATTCTCC GCCCCATGGC 241 TGACTAATTT TTTTTATTTA TACAGAGGCC GAGGCCGCCT CGGCCTCTGA GCTATTCCAG 301 AAGTAGTGAG GAGGCTTTTT TGGAGGCCTA GGCTTTTGCA AAAAGCTTGA TTGGGATCCA 361 CCGGTCGCCA CCATGGTGAG CAAGGGCGAG GAGCTGTTCA CCGGGGTGGT GCCCATCCTG 421 GTCGAGCTGG ACGGCGACGT AAACGGCCAC AAGTTCAGCG TGTCCGGCGA GGGCGAGGGC 481 GATGCCACCT ACGGCAAGCT GACCCTGAAG TTCATCTGCA CCACCGGCAA GCTGCCCGTG 541 CCCTGGCCCA CCCTCGTGAC CACCCTGACC TACGGCGTGC AGTGCTTCAG CCGCTACCCC 601 GACCACATGA AGCAGCACGA CTTCTTCAAG TCCGCCATGC CCGAAGGCTA CGTCCAGGAG 661 CGCACCATCT TCTTCAAGGA CGACGGCAAC TACAAGACCC GCGCCGAGGT GAAGTTCGAG 721 GGCGACACCC TGGTGAACCG CATCGAGCTG AAGGGCATCG ACTTCAAGGA GGACGGCAAC 781 ATCCTGGGGC ACAAGCTGGA GTACAACTAC AACAGCCACA ACGTCTATAT CATGGCCGAC 841 AAGCAGAAGA ACGGCATCAA GGTGAACTTC AAGATCCGCC ACAACATCGA GGACGGCAGC 901 GTGCAGCTCG CCGACCACTA CCAGCAGAAC ACCCCCATCG GCGACGGCCC CGTGCTGCTG 961 CCCGACAACC ACTACCTGAG CACCCAGTCC GCCCTGAGCA AAGACCCCAA CGAGAAGCGC 1021 GATCACATGG TCCTGCTGGA GTTCGTGACC GCCGCCGGGA TCACTCTCGG CATGGACGAG 1081 CTGTACAAGT AAAGCGGCCG CTTCGAGCAG ACATGATAAG ATACATTGAT GAGTTTGGAC 1141 AAACCACAAC TAGAATGCAG TGAAAAAAAT GCTTTATTTG TGAAATTTGT GATGCTATTG 1201 CTTTATTTGT AACCATTATA AGCTGCAATA AACAAGTTAA CAACAACAAT TGCATTCATT 1261 TTATGTTTCA GGTTCAGGGG GAGGTGTGGG AGGTTTTTTA AAGCAAGTAA AACCTCTACA 1321 AATGTGGTAA AATCGATAAG GATCCGGGCT GGCGTAATAG CGAAGAGGCC CGCACCGATC 1381 GCCCTTCCCA ACAGTTGCAG GTGGAGAAGA GCATGCGTGA GGCTCCGGTG CCCGTCAGTG 1441 GGCAGAGCGC ACATCGCCCA CAGTCCCCGA GAAGTTGGGG GGAGGGGTCG GCAATTGAAC 1501 CGGTGCCTAG AGAAGGTGGC GCGGGGTAAA CTGGGAAAGT GATGTCGTGT ACTGGCTCCG 1561 CCTTTTTCCC GAGGGTGGGG GAGAACCGTA TATAAGTGCA GTAGTCGCCG TGAACGTTCT 1621 TTTTCGCAAC GGGTTTGCCG CCAGAACACA GCTGAAGCTT CGAGGGGCTC GCATCTCTCC 1681 TTCACGCGCC CGCCGCCCTA CCTGAGGCCG CCATCCACGC CGGTTGAGTC GCGTTCTGCC 1741 GCCTCCCGCC TGTGGTGCCT CCTGAACTGC GTCCGCCGTC TAGGTAAGTT TAAAGCTCAG 1801 GTCGAGACCG GGCCTTTGTC CGGCGCTCCC TTGGAGCCTA CCTAGACTCA GCCGGCTCTC 1861 CACGCTTTGC CTGACCCTGC TTGCTCAACT CTACGTCTTT GTTTCGTTTT CTGTTCTGCG 1921 CCGTTACAGA TCCAAGCTGT GACCGGCGCC TACGTAAGTG ATGCTACCGG ACTCAGATCT 1981 CGAGAATTCA CGCGTGGTAC CACACCATGG CCCTCTGGCA GCAGGGGCAG AAACTCTACC 2041 TGCCACCCAC ACCCGTGTCA AAAGTCCTGT GTTCCGAGAC ATACGTCCAG CGGAAGTCAA 2101 TCTTCTACCA CGCCGAGACC GAAAGGCTCC TCACCATCGG CCACCCCTAC TACCCCGTCA 2161 GCATTGGCGC TAAGACCGTG CCCAAAGTCT CCGCCAACCA ATACCGCGTG TTCAAGATCC 2221 AGCTGCCCGA CCCAAACCAG TTCGCCCTGC CCGATCGCAC CGTGCATAAC CCCTCCAAGG 2281 AAAGACTCGT CTGGGCCGTG ATCGGCGTCC AAGTCTCACG GGGCCAACCC CTGGGCGGCA 2341 CCGTGACCGG CCATCCAACC TTCAACGCCC TCCTGGACGC CGAGAACGTC AACCGGAAAG 2401 TCACAACACA AACCACCGAC GATCGCAAGC AGACCGGGCT GGACGCCAAA CAGCAGCAAA 2461 TCCTCCTCCT GGGGTGCACA CCCGCTGAGG GCGAGTACTG GACCACCGCT CGGCCCTGCG 2521 TGACCGACAG GCTGGAGAAC GGGGCTTGTC CCCCCCTGGA GCTGAAGAAT AAGCATATCG 2581 AGGACGGCGA CATGATGGAG ATCGGCTTCG GCGCCGCTAA CTTCAAGGAG ATCAACGCCT 2641 CCAAGAGCGA CCTGCCCCTG GATATCCAGA ACGAAATTTG TCTCTATCCC GATTATCTGA 2701 AGATGGCCGA AGATGCCGCC GGCAACTCAA TGTTTTTCTT CGCCCGCAAG GAGCAAGTCT 2761 ACGTGCGGCA TATTTGGACA CGGGGCGGGA GCGAAAAGGA GGCTCCCACA ACCGACTTCT 2821 ACCTGAAAAA CAACAAGGGC GACGCTACAC TGAAGATCCC ATCCGTCCAC TTCGGCTCCC 2881 CATCCGGGAG CCTCGTCAGC ACCGACAACC AGATCTTCAA CAGACCATAT TGGCTGTTTA 2941 GGGCTCAAGG GATGAATAAC GGCATCGCTT GGAACAACCT GCTCTTCCTG ACCGTCGGCG 3001 ATAACACCAG GGGCACCAAC CTGACAATCT CCGTGGCTAG CGACGGCACA CCCCTGACCG 3061 AATACGACTC AAGCAAGTTT AACGTGTATC ACCGGCACAT GGAGGAGTAC AAACTGGCTT 3121 TCATCCTGGA ACTGTGTAGC GTCGAGATTA CCGCCCAGAC CGTCAGCCAC CTCCAGGGCC 3181 TGATGCCAAG CGTCCTGGAG AACTGGGAGA TCGGCGTCCA ACCACCAACA AGCAGCATCC 3241 TGGAAGATAC ATACAGATAC ATCGAAAGCC CCGCCACCAA GTGCGCCTCA AACGTGATCC 3301 CCGCCAAGGA GGATCCCTAC GCCGGCTTCA AATTCTGGAA TATCGACCTG AAGGAGAAAC 3361 TGAGCCTCGA TCTGGACCAG TTCCCACTCG GCCGGCGGTT CCTGGCCCAA CAGGGCGCTG 3421 GCTGCAGCAC CGTCCGGAAG AGGCGGATCT CACAAAAGAC CAGTTCCAAA CCCGCCAAGA 3481 AGAAGAAGAA GTAGGCCTCT AGCATTATCC CTAATACCTG CCACCCCACT CTTAATCAGT 3541 GGTGGAAGAA CGGTCTCAGA ACTGTTTGTT TCAATTGGCC ATTTAAGTTT AGTAGTAAAA 3601 GACTGGTTAA TGATAACAAT GCATCGTAAA ACCTTCAGAA GGAAAGGAGA ATGTTTTGTG 3661 GACCACTTTG GTTTTCTTTT TTGCGTGTGG CAGTTTTAAG TTATTAGTTT TTAAAATCAG 3721 TACTTTTTAA TGGAAACAAC TTGACCAAAA ATTTGTCACA GAATTTTGAG ACCCATTAAA 3781 AAAGTTAAAT GAGAAACCTG TGTGTTCCTT TGGTCAACAC CGAGACATTT AGGTGAAAGA 3841 CATCTAATTC TGGTTTTACG AATCTGGAAA CTTCTTGAAA ATGTAATTCT TGAGTTAACA 3901 CTTCTGGGTG GAGAATAGGG TTGTTTTCCC CCCACATAAT TGGAAGGGGA AGGAATATCA 3961 TTTAAAGCTA TGGGAGGGTT TCTTTGATTA CAACACTGGA GAGAAATGCA GCATGTTGCT 4021 GATTGCCTGT CACTAAAACA GGCCAAAAAC TGAGTCCTTG GGTTGCATAG AAAGCTTCAT 4081 GTTGCTAAAC CAATGTTAAG TGAATCTTTG GAAACAAAAT GTTTCCAAAT TACTGGGATG 4141 TGCATGTTGA AACGTGGGTT AATTAACTAG CCATGACCAA AATCCCTTAA CGTGAGTTTT 4201 CGTTCCACTG AGCGTCAGAC CCCGTAGAAA AGATCAAAGG ATCTTCTTGA GATCCTTTTT 4261 TTCTGCGCGT AATCTGCTGC TTGCAAACAA AAAAACCACC GCTACCAGCG GTGGTTTGTT 4321 TGCCGGATCA AGAGCTACCA ACTCTTTTTC CGAAGGTAAC TGGCTTCAGC AGAGCGCAGA 4381 TACCAAATAC TGTTCTTCTA GTGTAGCCGT AGTTAGGCCA CCACTTCAAG AACTCTGTAG 4441 CACCGCCTAC ATACCTCGCT CTGCTAATCC TGTTACCAGT GGCTGCTGCC AGTGGCGATA 4501 AGTCGTGTCT TACCGGGTTG GACTCAAGAC GATAGTTACC GGATAAGGCG CAGCGGTCGG 4561 GCTGAACGGG GGGTTCGTGC ACACAGCCCA GCTTGGAGCG AACGACCTAC ACCGAACTGA 4621 GATACCTACA GCGTGAGCTA TGAGAAAGCG CCACGCTTCC CGAAGGGAGA AAGGCGGACA 4681 GGTATCCGGT AAGCGGCAGG GTCGGAACAG GAGAGCGCAC GAGGGAGCTT CCAGGGGGAA 4741 ACGCCTGGTA TCTTTATAGT CCTGTCGGGT TTCGCCACCT CTGACTTGAG CGTCGATTTT 4801 TGTGATGCTC GTCAGGGGGG CGGAGCCTAT GGAAAAACGC CAGCAACGCG GCCTTTTTAC 4861 GGTTCCTGGC CTTTTGCTGG CCTTTTGCTC ACATGTTCTT AATTAAATTT TTCAAAAGTA 4921 GTTGACAATT AATCATCGGC ATAGTATATC GGCATAGTAT AATACGACTC ACTATAGGAG 4981 GGCCATCATG GCCAAGTTGA CCAGTGCTGT CCCAGTGCTC ACAGCCAGGG ATGTGGCTGG 5041 AGCTGTTGAG TTCTGGACTG ACAGGTTGGG GTTCTCCAGA GATTTTGTGG AGGATGACTT 5101 TGCAGGTGTG GTCAGAGATG ATGTCACCCT GTTCATCTCA GCAGTCCAGG ACCAGGTGGT 5161 GCCTGACAAC ACCCTGGCTT GGGTGTGGGT GAGAGGACTG GATGAGCTGT ATGCTGAGTG 5221 GAGTGAGGTG GTCTCCACCA ACTTCAGGGA TGCCAGTGGC CCTGCCATGA CAGAGATTGG 5281 AGAGCAGCCC TGGGGGAGAG AGTTTGCCCT GAGAGACCCA GCAGGCAACT GTGTGCACTT 5341 TGTGGCAGAG GAGCAGGACT GAGGATAAGA ATTGTAACAA AAAACCCCGC CCCGGCGGGG 5401 TTTTTTGTTA ATTAA //