LOCUS PCRPVL2.TX 4873 BP DS-DNA CIRCULAR SYN 10-NOV-2003 DEFINITION - ACCESSION - KEYWORDS - SOURCE - FEATURES Location/Qualifiers promoter 14..>544 /note="CMV promoter" mutation 25..26 /note="CA -> AC creates Hinc2 (guess)" 5'UTR 545..>827 /note="HTLV1 R-U5" CDS 830..>2308 /note="codon modified CRPV L2" polyA_signal 2318..2551 /note="SV40 Late polyA" rep_origin 2569..3290 /note="MB1 Ori" misc_feature 3312..3655 /note="SV40 homology" promoter 3481..3655 /note="SV40 early promoter" rep_origin 3504..3655 /note="SV40 Ori" misc_feature 3553..3602 /note="SV40 transcription start points" CDS 3568..3639 /note="SELP" promoter 3690..3745 /note="EM7" CDS 3765..4559 /note="Kan/Neo resistance" polyA_signal 4607..4873 /note="HSV TK pA" BASE COUNT 1099 A 1432 C 1288 G 1054 T 0 OTHER ORIGIN - 1 CCTGCAGGGC CCACTAGTCC GTTAACTAAC TTACGGTAAA TGGCCCGCCT GGCTGACCGC 61 CCAACGACCC CCGCCCATTG ACGTCAATAA TGACGTATGT TCCCATAGTA ACGCCAATAG 121 GGACTTTCCA TTGACGTCAA TGGGTGGAGT ATTTACGGTA AACTGCCCAC TTGGCAGTAC 181 ATCAAGTGTA TCATATGCCA AGTACGCCCC CTATTGACGT CAATGACGGT AAATGGCCCG 241 CCTGGCATTA TGCCCAGTAC ATGACCTTAT GGGACTTTCC TACTTGGCAG TACATCTACG 301 TATTAGTCAT CGCTATTACC ATGATGATGC GGTTTTGGCA GTACATCAAT GGGCGTGGAT 361 AGCGGTTTGA CTCACGGGGA TTTCCAAGTC TCCACCCCAT TGACGTCAAT GGGAGTTTGT 421 TTTGGCACCA AAATCAACGG GACTTTCCAA AATGTCGTAA CAACTCCGCC CCATTGACGC 481 AAATGAGCGG TAGGCGTGTA CGGTGGGAGG TCTATATAAG CAGAGCTCGT TTAGTGAACC 541 GTAAGCTTCG AGGGGCTCGC ATCTCTCCTT CACGCGCCCG CCGCCCTACC TGAGGCCGCC 601 ATCCACGCCG GTTGAGTCGC GTTCTGCCGC CTCCCGCCTG TGGTGCCTCC TGAACTGCGT 661 CCGCCGTCTA GGTAAGTTTA AAGCTCAGGT CGAGACCGGG CCTTTGTCCG GCGCTCCCTT 721 GGAGCCTACC TAGACTCAGC CGGCTCTCCA CGCTTTGCCT GACCCTGCTT GCTCAACTCT 781 ACGTCTTTGT TTCGTTTTCT GTTCTGCGCC GTTACAGATC CAAGCCACCA TGGTCGCCAG 841 AAGCAGGAAG AGGCGCGCCG CCCCCCAAGA TATCTACCCC ACCTGCAAGA TCGCCGGGAA 901 CTGTCCCGCC GACATTCAAA ACAAGTTCGA GAATAAGACC ATCGCCGACA AGATCCTCCA 961 ATACGGGTCA TTGGGCGTGT TCTTCGGCGG CTTGGGCATT AGCTCCGCCG GCGGCAGCGG 1021 CGGCAGGTTG GGCTATACAC CCCTGAGCGG CGGCGGCGGC AGAGTCATCG CCGCCGCACC 1081 CGTGCGCCCC CCAATCACCA CCGAGAGCGT GGGGCCCTTG GACATCGTCC CCGAAGTGGC 1141 CGACCCCGGC GGCCCCACCT TGGTCAGCTT GCACGAGCTC CCCGCCGAGA CCCCCTACGT 1201 TAGCTCAACC AACGTCACCG GCGACGGGGC CGCCGAACCA TTGCCCGCCG GCCACGGCGG 1261 CTCACAAATC AGCGATGTGA CCAGCGGCAC CAGTGGGACC GTCAGTCGCA CCCATATCAA 1321 CAATCCCGTG TTTGAAGCCC CCATGACAGG CGACCAAGAC GTCAGCGACG TCCACGTGTT 1381 CGCACATAGC GAGTCCTCCA TCACCATCAA TCAGACCGAG AATACCGGGG GCGAATTGAT 1441 CGAAATGGTC CCATTGCGCC ATCCACCCCG GTCCGAAGGC GACTTTCGCG AGACCAGCTT 1501 TTCAACCTCA ACCCCCAATC CCGACCGGAG CGCCCTGAGG AGCATCAATG TGGCCTCACG 1561 CCGCTACCAA CAAGTGCAGG TCGAGAATCC CGCATTTCTC AATCGCCCAC GCGAGCTCGT 1621 CCAATTTGAG AATACCTTCG ATAACCCCGC CTTCGTCGAC GACGAACAGT TGTCATTGTT 1681 GTTCGAGCAA GACTTGGATA CCGTGGTCGC CGCCCCCGAC CCCGCCTTTC AAGACGTCGT 1741 CAGGCTGTCC CGCCCAAGCT TTACCCAAAG TCGCGCCGGC CGCGTCAGAG TCTCAAGGCT 1801 CGGCCGCACC TTGACCATGC AGACCAGGTC CGGCAAAGCA TTCGGCCCCG CAAAGCATTT 1861 CTATTACGAA TTGAGCTCAA TCGCCGAGGG CCCCGAACCC GATATCTTGA TTCCTGAGAG 1921 CGAGCAAGAG ACCAGCTTTA CCGACGCAAC CAGCAAGGAT ACCCAGCAAG AGGCCGAGGT 1981 CTACGCCGAC GGCAGCACAC TGGAGACCGA TACCAGCGCC GACGAGAATC TCACCTTGGT 2041 CTTCTCCGAT CGCGGGCGCG GCCAAGGCAG CCACGTGCCC ATCCCCGGGA AAAGTACCAT 2101 CGGCGGCCCC ATCAACATCG GCGATTCAAA GTATTACACC CTCAATCCCG GCGAGACCAC 2161 CTCATTCGAG GCCGACGTGA TCAGCCCCGT CTTTATCTTC GAAGGCAATG CCGACGGGAC 2221 CTATTACTTG GAAGAGCCCT TGAGGAAAAA GCGCAGGAAG AGCATTTTCC TGTTGGCCGA 2281 CGGGTCCGTC GCCGTGTATG CCGAATGAGC TCGAGGCTAG CTGGCCAGAC ATGATAAGAT 2341 ACATTGATGA GTTTGGACAA ACCACAACTA GAATGCAGTG AAAAAAATGC TTTATTTGTG 2401 AAATTTGTGA TGCTATTGCT TTATTTGTAA CCATTATAAG CTGCAATAAA CAAGTTAACA 2461 ACAACAATTG CATTCATTTT ATGTTTCAGG TTCAGGGGGA GGTGTGGGAG GTTTTTTAAA 2521 GCAAGTAAAA CCTCTACAAA TGTGGTATGG AATTCTTAAT TAACTAGCCA TGACCAAAAT 2581 CCCTTAACGT GAGTTTTCGT TCCACTGAGC GTCAGACCCC GTAGAAAAGA TCAAAGGATC 2641 TTCTTGAGAT CCTTTTTTTC TGCGCGTAAT CTGCTGCTTG CAAACAAAAA AACCACCGCT 2701 ACCAGCGGTG GTTTGTTTGC CGGATCAAGA GCTACCAACT CTTTTTCCGA AGGTAACTGG 2761 CTTCAGCAGA GCGCAGATAC CAAATACTGT TCTTCTAGTG TAGCCGTAGT TAGGCCACCA 2821 CTTCAAGAAC TCTGTAGCAC CGCCTACATA CCTCGCTCTG CTAATCCTGT TACCAGTGGC 2881 TGCTGCCAGT GGCGATAAGT CGTGTCTTAC CGGGTTGGAC TCAAGACGAT AGTTACCGGA 2941 TAAGGCGCAG CGGTCGGGCT GAACGGGGGG TTCGTGCACA CAGCCCAGCT TGGAGCGAAC 3001 GACCTACACC GAACTGAGAT ACCTACAGCG TGAGCTATGA GAAAGCGCCA CGCTTCCCGA 3061 AGGGAGAAAG GCGGACAGGT ATCCGGTAAG CGGCAGGGTC GGAACAGGAG AGCGCACGAG 3121 GGAGCTTCCA GGGGGAAACG CCTGGTATCT TTATAGTCCT GTCGGGTTTC GCCACCTCTG 3181 ACTTGAGCGT CGATTTTTGT GATGCTCGTC AGGGGGGCGG AGCCTATGGA AAAACGCCAG 3241 CAACGCGGCC TTTTTACGGT TCCTGGCCTT TTGCTGGCCT TTTGCTCACA TGTTCTTAAT 3301 TAAGCTGTAC ACTGTGGAAT GTGTGTCAGT TAGGGTGTGG AAAGTCCCCA GGCTCCCCAG 3361 CAGGCAGAAG TATGCAAAGC ATGCATCTCA ATTAGTCAGC AACCAGGTGT GGAAAGTCCC 3421 CAGGCTCCCC AGCAGGCAGA AGTATGCAAA GCATGCATCT CAATTAGTCA GCAACCATAG 3481 TCCCGCCCCT AACTCCGCCC ATCCCGCCCC TAACTCCGCC CAGTTCCGCC CATTCTCCGC 3541 CCCATGACTG ACTAATTTTT TTTATTTATG CAGAGGCCGA GGCCGCCTCT GCCTCTGAGC 3601 TATTCCAGAA GTAGTGAGGA GGCTTTTTTG GAGGCCTAGG CTTTTGCAAA AAGCTCCCGG 3661 GAGCTTGTAT ATCCATTTTC GGATCTGATC AGCACGTGTT GACAATTAAT CATCGGCATA 3721 GTATATCGGC ATAGTATAAT ACGACTCACT ATAGGAGGGC CACCATGATT GAACAAGATG 3781 GATTGCACGC AGGTTCTCCG GCCGCTTGGG TGGAGAGGCT ATTCGGCTAT GACTGGGCAC 3841 AACAGACAAT CGGCTGCTCT GATGCCGCCG TGTTCCGGCT GTCAGCGCAG GGGCGCCCGG 3901 TTCTTTTTGT CAAGACCGAC CTGTCCGGTG CCCTGAATGA ACTGCAAGAC GAGGCAGCGC 3961 GGCTATCGTG GCTGGCCACG ACGGGCGTTC CTTGCGCAGC TGTGCTCGAC GTTGTCACTG 4021 AAGCGGGAAG GGACTGGCTG CTATTGGGCG AAGTGCCGGG GCAGGATCTC CTGTCATCTC 4081 ACCTTGCTCC TGCCGAGAAA GTATCCATCA TGGCTGATGC AATGCGGCGG CTGCATACGC 4141 TTGATCCGGC TACCTGCCCA TTCGACCACC AAGCGAAACA TCGCATCGAG CGAGCACGTA 4201 CTCGGATGGA AGCCGGTCTT GTCGATCAGG ATGATCTGGA CGAAGAGCAT CAGGGGCTCG 4261 CGCCAGCCGA ACTGTTCGCC AGGCTCAAGG CGAGCATGCC CGACGGCGAG GATCTCGTCG 4321 TGACACATGG CGATGCCTGC TTGCCGAATA TCATGGTGGA AAATGGCCGC TTTTCTGGAT 4381 TCATCGACTG TGGCCGGCTG GGTGTGGCGG ACCGCTATCA GGACATAGCG TTGGCTACCC 4441 GTGATATTGC TGAAGAGCTT GGCGGCGAAT GGGCTGACCG CTTCCTCGTG CTTTACGGTA 4501 TCGCCGCTCC CGATTCGCAG CGCATCGCCT TCTATCGCCT TCTTGACGAG TTCTTCTGAG 4561 CGGGACTCTG GGGTTCGAAA TGACCGACCA AGCGAATTCG CTAGAGGGAG GCTAACTGAA 4621 ACACGGAAGG AGACAATACC GGAAGGAACC CGCGCTATGA CGGCAATAAA AAGACAGAAT 4681 AAAACGCACG GTGTTGGGTC GTTTGTTCAT AAACGCGGGG TTCGGTCCCA GGGCTGGCAC 4741 TCTGTCGATA CCCCACCGAG ACCCCATTGG GGCCAATACG CCCGCGTTTC TTCCTTTTCC 4801 CCACCCCACC CCCCAAGTTC GGGTGAAGGC CCAGGGCTCG CAGCCAACGT CGGGGCGGCA 4861 GGCCCTGCCA TAG //