LOCUS P8FWB.TXT 7917 BP DS-DNA CIRCULAR SYN 17-MAY-2003 DEFINITION - ACCESSION - KEYWORDS - SOURCE - FEATURES Location/Qualifiers misc_feature complement(>29..2016) /note="2kb EcoR1-Bgl frag with SAR in it" mutation 1407..1407 /note="A in standard chrom 9 map, G in mine and M83137" misc_feature complement(>2062..2070) /note="SV40 minor late 19S RNA" promoter <2062..>2405 /note="SV40 promoter (∆SELP)" enhancer 2084..2226 /note="SV40 enhancer elements" misc_feature 2231..2294 /note="SV40 21bp repeats" rep_origin 2251..>2405 /note="SV40 Ori" mRNA 2300..2306 /note="late-early transcription startpoints" mutation 2320..2320 /note="G->A kills SELP ATG" mRNA 2340..2346 /note="early-early transcription start points" misc_feature 2405..2405 /note="end homology to SV40" promoter 2440..2494 /note="EM7 promoter" CDS 2514..2936 /note="Blasticidin R" polyA_signal 2966..>3187 /note="SV40 Late PolyA" enhancer <3278..3475 /note="EF-1alpha promoter core domain" promoter <3278..>4456 /note="EF1a promoter and UTR" misc_difference 3278..>3469 /note="rhesus-derived" exon 3476..3508 /note="EF-1a exon 1" intron 3509..4448 /note="EF-1a intron A" exon 4448..4456 /note="EF-1a exon 2 leader" CDS 4573..5292 /note="EGFP" mRNA 5376..>5964 /note="WPRE" polyA_signal 6000..6668 /note="hEF1a polyA signal" rep_origin 6669..7402 /note="MB1 Ori" promoter 7403..7489 /note="EM7 promoter" promoter 7423..7469 /note="EM7 promoter" CDS 7490..7864 /note="Zeo" terminator 7865..7917 /note="terminator (rpmB/G)" BASE COUNT 2081 A 1815 C 1951 G 2070 T 0 OTHER ORIGIN - 1 CCCTGCATCA AGCTTGGTAC CGAGCTCGGA TCTAAATAAA CTTATAAATT GTGAGAGAAA 61 TTAATGAATG TCTAAGTTAA TGCAGAAACG GAGAGACATA CTATATTCAT GAACTAAAAG 121 ACTTAATATT GTGAAGGTAT ACTTTCTTTC CACATAAATT TGTAGTCAAT ATGTTCACCC 181 CAAAAAAGCT GTTTGTTAAC TTGCCAACCT CATTCTAAAA TGTATATAGA AGCCCAAAAG 241 ACAATAACAA AAATATTCTT GTAGAACAAA ATGGGAAAGA ATGTTCCACT AAATATCAAG 301 ATTTAGAGCA AAGCATGAGA TGTGTGGGGA TAGACAGTGA GGCTGATAAA ATAGAGTAGA 361 GCTCAGAAAC AGACCCATTG ATATATGTAA GTGACCTATG AAAAAAATAT GGCATTTTAC 421 AATGGGAAAA TGATGATCTT TTTCTTTTTT AGAAAAACAG GGAAATATAT TTATATGTAA 481 AAAATAAAAG GGAACCCATA TGTCATACCA TACACACAAA AAAATTCCAG TGAATTATAA 541 GTCTAAATGG AGAAGGCAAA ACTTTAAATC TTTTAGAAAA TAATATAGAA GCATGCCATC 601 ATGACTTCAG TGTAGAGAAA AATTTCTTAT GACTCAAAGT CCTAACCACA AAGAAAAGAT 661 TGTTAATTAG ATTGCATGAA TATTAAGACT TATTTTTAAA ATTAAAAAAC CATTAAGAAA 721 AGTCAGGCCA TAGAATGACA GAAAATATTT GCAACACCCC AGTAAAGAGA ATTGTAATAT 781 GCAGATTATA AAAAGAAGTC TTACAAATCA GTAAAAAATA AAACTAGACA AAAATTTGAA 841 CAGATGAAAG AGAAACTCTA AATAATCATT ACACATGAGA AACTCAATCT CAGAAATCAG 901 AGAACTATCA TTGCATATAC ACTAAATTAG AGAAATATTA AAAGGCTAAG TAACATCTGT 961 GGCAATATTG ATGGTATATA ACCTTGATAT GATGTGATGA GAACAGTACT TTACCCCATG 1021 GGCTTCCTCC CCAAACCCTT ACCCCAGTAT AAATCATGAC AAATATACTT TAAAAACCAT 1081 TACCCTATAT CTAACCAGTA CTCCTCAAAA CTGTCAAGGT CATCAAAAAT AAGAAAAGTC 1141 TGAGGAACTG TCAAAACTAA GAGGAACCCA AGGAGACATG AGAATTATAT GTAATGTGGC 1201 ATTCTGAATG AGATCCCAGA ACAGAAAAAG AACAGTAGCT AAAAAACTAA TGAAATATAA 1261 ATAAAGTTTG AACTTTAGTT TTTTTTAAAA AAGAGTAGCA TTAACACGGC AAAGCCATTT 1321 TCATATTTTT CTTGAACATT AAGTACAAGT CTATAATTAA AAATTTTTTA AATGTAGTCT 1381 GGAACATTGC CAGAAACAGA AGTACAGCAG CTATCTGTGC TGTCGCCTAA CTATCCATAG 1441 CTGATTGGTC TAAAATGAGA TACATCAACG CTCCTCCATG TTTTTTGTTT TCTTTTTAAA 1501 TGAAAAACTT TATTTTTTAA GAGGAGTTTC AGGTTCATAG CAAAATTGAG AGGAAGGTAC 1561 ATTCAAGCTG AGGAAGTTTT CCTCTATTCC TAGTTTACTG AGAGATTGCA TCATGAATGG 1621 GTGTTAAATT TTGTCAAATG CTTTTTCTGT GTCTATCAAT ATGACCATGT GATTTTCTTC 1681 TTTAACCTGT TGATGGGACA AATTACGTTA ATTGATTTTC AAACGTTGAA CCACCCTTAC 1741 ATATCTGGAA TAAATTCTAC TTGGTTGTGG TGTATATTTT TTGATACATT CTTGGATTCT 1801 TTTTGCTAAT ATTTTGTTGA AAATGTTTGT ATCTTTGTTC ATGAGAGATA TTGGTCTGTT 1861 GTTTTCTTTT CTTGTAATGT CATTTTCTAG TTCCGGTATT AAGGTAATGC TGGCCTAGTT 1921 GAATGATTTA GGAAGTATTC CCTCTGCTTC TGTCTTCTGA AAGAGATTGT AGAAAGTTGA 1981 TACAATTTTT TTTTCTTTAA ATATTTGATA GAATTCTGCA GGGCCTGAAA TAACCTCTGA 2041 AAGAGGAACT TGGTTAGGTA CCTGTGGAAT GTGTGTCAGT TAGGGTGTGG AAAGTCCCCA 2101 GGCTCCCCAG CAGGCAGAAG TATGCAAAGC ATGCATCTCA ATTAGTCAGC AACCAGGTGT 2161 GGAAAGTCCC CAGGCTCCCC AGCAGGCAGA AGTATGCAAA GCATGCATCT CAATTAGTCA 2221 GCAACCATAG TCCCGCCCCT AACTCCGCCC ATCCCGCCCC TAACTCCGCC CAGTTCCGCC 2281 CATTCTCCGC CCCATGGCTG ACTAATTTTT TTTATTTATA CAGAGGCCGA GGCCGCCTCG 2341 GCCTCTGAGC TATTCCAGAA GTAGTGAGGA GGCTTTTTTG GAGGCCTAGG CTTTTGCAAA 2401 AAGCTCCCGG GAGCTTGTAT ATCCATTTTC GGATCTGATC AGCACGTGTT GACAATTAAT 2461 CATCGGCATA GTATATCGGC ATAGTATAAT ACGACAAGGT GAGGAACTAA ATCATGAAGA 2521 CCTTCAACAT CTCTCAGCAG GATCTGGAGC TGGTGGAGGT CGCCACTGAG AAGATCACCA 2581 TGCTCTATGA GGACAACAAG CACCATGTCG GGGCGGCCAT CAGGACCAAG ACTGGGGAGA 2641 TCATCTCTGC TGTCCACATT GAGGCCTACA TTGGCAGGGT CACTGTCTGT GCTGAAGCCA 2701 TTGCCATTGG GTCTGCTGTG AGCAACGGGC AGAAGGACTT TGACACCATT GTGGCTGTCA 2761 GGCACCCCTA CTCTGATGAG GTGGACAGAT CCATCAGGGT GGTCAGCCCC TGTGGCATGT 2821 GCAGAGAGCT CATCTCTGAC TATGCTCCTG ACTGCTTTGT GCTCATTGAG ATGAATGGCA 2881 AGCTGGTCAA AACCACCATT GAGGAACTCA TCCCCCTCAA GTACACCAGG AACTAAACCT 2941 GAATTCGCTA GAGGGCCGCT TCGAGCAGAC ATGATAAGAT ACATTGATGA GTTTGGACAA 3001 ACCACAACTA GAATGCAGTG AAAAAAATGC TTTATTTGTG AAATTTGTGA TGCTATTGCT 3061 TTATTTGTAA CCATTATAAG CTGCAATAAA CAAGTTAACA ACAACAATTG CATTCATTTT 3121 ATGTTTCAGG TTCAGGGGGA GGTGTGGGAG GTTTTTTAAA GCAAGTAAAA CCTCTACAAA 3181 TGTGGTAAAA TCGATAAGGA TCCGGGCTGG CGTAATAGCG AAGAGGCCCG CACCGATCGC 3241 CCTTCCCAAC AGTTGCGGTG GAGAAGAGCA TGCGTGAGGC TCCGGTGCCC GTCAGTGGGC 3301 AGAGCGCACA TCGCCCACAG TCCCCGAGAA GTTGGGGGGA GGGGTCGGCA ATTGAACCGG 3361 TGCCTAGAGA AGGTGGCGCG GGGTAAACTG GGAAAGTGAT GTCGTGTACT GGCTCCGCCC 3421 TTTTCCCGAG GGTGGGGGAG AACCGTATAT AAGTGCAGTA GTCGCTGTGA ACGTTCTTTT 3481 TCGCAACGGG TTTGCCGCCA GAACACAGGT AAGTGCCGTG TGTGGTTCCC GCGGGCCTGG 3541 CCTCTTTACG GGTTATGGCC CTTGCGTGCC TTGAATTACT TCCACCTGGC TGCAGTACGT 3601 GATTCTTGAT CCCGAGCTTC GGGTTGGAAG TGGGTGGGAG AGTTCGAGGC CTTGCGCTTA 3661 AGGAGCCCCT TCGCCTCGTG CTTGAGTTGA GGCCTGGCCT GGGCGCTGGG GCCGCCGCGT 3721 GCGAATCTGG TGGCACCTTC GCGCCTGTCT CGCTGCTTTC GATAAGTCTC TAGCCATTTA 3781 AAATTTTTGA TGACCTGCTG CGACGCTTTT TTTCTGGCAA GATAGTCTTG TAAATGCGGG 3841 CCAAGATCTG CACACTGGTA TTTCGGTTTT TGGGGCCGCG GGCGGCGACG GGGCCCGTGC 3901 GTCCCAGCGC ACATGTTCGG CGAGGCGGGG CCTGCGAGCG CGGCCACCGA GAATCGGACG 3961 GGGGTAGTCT CAAGCTGGCC GGCCTGCTCT GGTGCCTGGC CTCGCGCCGC CGTGTATCGC 4021 CCCGCCCTGG GCGGCAAGGC TGGCCCGGTC GGCACCAGTT GCGTGAGCGG AAAGATGGCC 4081 GCTTCCCGGC CCTGCTGCAG GGAGCTCAAA ATGGAGGACG CGGCGCTCGG GAGAGCGGGC 4141 GGGTGAGTCA CCCACACAAA GGAAAAGGGC CTTTCCGTCC TCAGCCGTCG CTTCATGTGA 4201 CTCCACGGAG TACCGGGCGC CGTCCAGGCA CCTCGATTAG TTCTCGAGCT TTTGGAGTAC 4261 GTCGTCTTTA GGTTGGGGGG AGGGGTTTTA TGCGATGGAG TTTCCCCACA CTGAGTGGGT 4321 GGAGACTGAA GTTAGGCCAG CTTGGCACTT GATGTAATTC TCCTTGGAAT TTGCCCTTTT 4381 TGAGTTTGGA TCTTGGTTCA TTCTCAAGCC TCAGACAGTG GTTCAAAGTT TTTTTCTTCC 4441 ATTTCAGGTG TCGTGAGGAA TTCTCTAGAG ATCCCTCGAC CTCGAGATCC ATTGTGCTGG 4501 ATCTGCGATC TAAGTAAGCT TCGAATTCTG CAGTCGACGG TACCGCGGGC CCGGGATCCA 4561 CCGGTCGCCA CCATGGTGAG CAAGGGCGAG GAGCTGTTCA CCGGGGTGGT GCCCATCCTG 4621 GTCGAGCTGG ACGGCGACGT AAACGGCCAC AAGTTCAGCG TGTCCGGCGA GGGCGAGGGC 4681 GATGCCACCT ACGGCAAGCT GACCCTGAAG TTCATCTGCA CCACCGGCAA GCTGCCCGTG 4741 CCCTGGCCCA CCCTCGTGAC CACCCTGACC TACGGCGTGC AGTGCTTCAG CCGCTACCCC 4801 GACCACATGA AGCAGCACGA CTTCTTCAAG TCCGCCATGC CCGAAGGCTA CGTCCAGGAG 4861 CGCACCATCT TCTTCAAGGA CGACGGCAAC TACAAGACCC GCGCCGAGGT GAAGTTCGAG 4921 GGCGACACCC TGGTGAACCG CATCGAGCTG AAGGGCATCG ACTTCAAGGA GGACGGCAAC 4981 ATCCTGGGGC ACAAGCTGGA GTACAACTAC AACAGCCACA ACGTCTATAT CATGGCCGAC 5041 AAGCAGAAGA ACGGCATCAA GGTGAACTTC AAGATCCGCC ACAACATCGA GGACGGCAGC 5101 GTGCAGCTCG CCGACCACTA CCAGCAGAAC ACCCCCATCG GCGACGGCCC CGTGCTGCTG 5161 CCCGACAACC ACTACCTGAG CACCCAGTCC GCCCTGAGCA AAGACCCCAA CGAGAAGCGC 5221 GATCACATGG TCCTGCTGGA GTTCGTGACC GCCGCCGGGA TCACTCTCGG CATGGACGAG 5281 CTGTACAAGT AAAGCGGCCG CTCCACCGCG GTGGCGGCCG CTCTAGAACT AGTGGATCCC 5341 CCGGGCTGCA GGAATTCGAT ATCAAGCTTA TCGATAATCA ACCTCTGGAT TACAAAATTT 5401 GTGAAAGATT GACTGGTATT CTTAACTATG TTGCTCCTTT TACGCTATGT GGATACGCTG 5461 CTTTAATGCC TTTGTATCAT GCTATTGCTT CCCGTATGGC TTTCATTTTC TCCTCCTTGT 5521 ATAAATCCTG GTTGCTGTCT CTTTATGAGG AGTTGTGGCC CGTTGTCAGG CAACGTGGCG 5581 TGGTGTGCAC TGTGTTTGCT GACGCAACCC CCACTGGTTG GGGCATTGCC ACCACCTGTC 5641 AGCTCCTTTC CGGGACTTTC GCTTTCCCCC TCCCTATTGC CACGGCGGAA CTCATCGCCG 5701 CCTGCCTTGC CCGCTGCTGG ACAGGGGCTC GGCTGTTGGG CACTGACAAT TCCGTGGTGT 5761 TGTCGGGGAA ATCATCGTCC TTTCCTTGGC TGCTCGCCTG TGTTGCCACC TGGATTCTGC 5821 GCGGGACGTC CTTCTGCTAC GTCCCTTCGG CCCTCAATCC AGCGGACCTT CCTTCCCGCG 5881 GCCTGCTGCC GGCTCTGCGG CCTCTTCCGC GTCTTCGCCT TCGCCCTCAG ACGAGTCGGA 5941 TCTCCCTTTG GGCCGCCTCC CCGCATCGAT ACCGTCGGCC CACTGCTCCC TAAACCTGAG 6001 CTAGCATTAT CCCTAATACC TGCCACCCCA CTCTTAATCA GTGGTGGAAG AACGGTCTCA 6061 GAACTGTTTG TTTCAATTGG CCATTTAAGT TTAGTAGTAA AAGACTGGTT AATGATAACA 6121 ATGCATCGTA AAACCTTCAG AAGGAAAGGA GAATGTTTTG TGGACCACTT TGGTTTTCTT 6181 TTTTGCGTGT GGCAGTTTTA AGTTATTAGT TTTTAAAATC AGTACTTTTT AATGGAAACA 6241 ACTTGACCAA AAATTTGTCA CAGAATTTTG AGACCCATTA AAAAAGTTAA ATGAGAAACC 6301 TGTGTGTTCC TTTGGTCAAC ACCGAGACAT TTAGGTGAAA GACATCTAAT TCTGGTTTTA 6361 CGAATCTGGA AACTTCTTGA AAATGTAATT CTTGAGTTAA CACTTCTGGG TGGAGAATAG 6421 GGTTGTTTTC CCCCCACATA ATTGGAAGGG GAAGGAATAT CATTTAAAGC TATGGGAGGG 6481 TTTCTTTGAT TACAACACTG GAGAGAAATG CAGCATGTTG CTGATTGCCT GTCACTAAAA 6541 CAGGCCAAAA ACTGAGTCCT TGGGTTGCAT AGAAAGCTTC ATGTTGCTAA ACCAATGTTA 6601 AGTGAATCTT TGGAAACAAA ATGTTTCCAA ATTACTGGGA TGTGCATGTT GAAACGTGGG 6661 TTAATTAACT AGCCATGACC AAAATCCCTT AACGTGAGTT TTCGTTCCAC TGAGCGTCAG 6721 ACCCCGTAGA AAAGATCAAA GGATCTTCTT GAGATCCTTT TTTTCTGCGC GTAATCTGCT 6781 GCTTGCAAAC AAAAAAACCA CCGCTACCAG CGGTGGTTTG TTTGCCGGAT CAAGAGCTAC 6841 CAACTCTTTT TCCGAAGGTA ACTGGCTTCA GCAGAGCGCA GATACCAAAT ACTGTTCTTC 6901 TAGTGTAGCC GTAGTTAGGC CACCACTTCA AGAACTCTGT AGCACCGCCT ACATACCTCG 6961 CTCTGCTAAT CCTGTTACCA GTGGCTGCTG CCAGTGGCGA TAAGTCGTGT CTTACCGGGT 7021 TGGACTCAAG ACGATAGTTA CCGGATAAGG CGCAGCGGTC GGGCTGAACG GGGGGTTCGT 7081 GCACACAGCC CAGCTTGGAG CGAACGACCT ACACCGAACT GAGATACCTA CAGCGTGAGC 7141 TATGAGAAAG CGCCACGCTT CCCGAAGGGA GAAAGGCGGA CAGGTATCCG GTAAGCGGCA 7201 GGGTCGGAAC AGGAGAGCGC ACGAGGGAGC TTCCAGGGGG AAACGCCTGG TATCTTTATA 7261 GTCCTGTCGG GTTTCGCCAC CTCTGACTTG AGCGTCGATT TTTGTGATGC TCGTCAGGGG 7321 GGCGGAGCCT ATGGAAAAAC GCCAGCAACG CGGCCTTTTT ACGGTTCCTG GCCTTTTGCT 7381 GGCCTTTTGC TCACATGTTC TTAATTAAAT TTTTCAAAAG TAGTTGACAA TTAATCATCG 7441 GCATAGTATA TCGGCATAGT ATAATACGAC TCACTATAGG AGGGCCATCA TGGCCAAGTT 7501 GACCAGTGCT GTCCCAGTGC TCACAGCCAG GGATGTGGCT GGAGCTGTTG AGTTCTGGAC 7561 TGACAGGTTG GGGTTCTCCA GAGATTTTGT GGAGGATGAC TTTGCAGGTG TGGTCAGAGA 7621 TGATGTCACC CTGTTCATCT CAGCAGTCCA GGACCAGGTG GTGCCTGACA ACACCCTGGC 7681 TTGGGTGTGG GTGAGAGGAC TGGATGAGCT GTATGCTGAG TGGAGTGAGG TGGTCTCCAC 7741 CAACTTCAGG GATGCCAGTG GCCCTGCCAT GACAGAGATT GGAGAGCAGC CCTGGGGGAG 7801 AGAGTTTGCC CTGAGAGACC CAGCAGGCAA CTGTGTGCAC TTTGTGGCAG AGGAGCAGGA 7861 CTGAGGATAA GAATTGTAAC AAAAAACCCC GCCCCGGCGG GGTTTTTTGT TAATTAA //