LOCUS P8RWB.TXT 7828 BP DS-DNA CIRCULAR SYN 17-MAY-2003 DEFINITION - ACCESSION - KEYWORDS - SOURCE - FEATURES Location/Qualifiers misc_feature complement(>29..2016) /note="2kb EcoR1-Bgl frag with SAR in it" promoter <2062..>2405 /note="SV40 promoter" misc_feature complement(>2062..2070) /note="SV40 minor late 19S RNA" enhancer 2084..2226 /note="SV40 enhancer elements" misc_feature 2231..2294 /note="SV40 21bp repeats" rep_origin 2251..>2405 /note="SV40 Ori" mRNA 2300..2306 /note="late-early transcription startpoints" mutation 2320..2320 /note="G->A kills SELP ATG" mRNA 2340..2346 /note="early-early transcription start points" misc_feature 2405..2405 /note="end homology to SV40" promoter 2440..2494 /note="EM7 promoter" CDS 2514..2936 /note="Blasticidin R" polyA_signal 2966..>3187 /note="SV40 Late PolyA" enhancer <3279..3476 /note="EF-1alpha promoter core domain" promoter <3279..>4457 /note="EF1a promoter and UTR" exon 3477..3509 /note="EF-1a exon 1" intron 3510..4449 /note="EF-1a intron A" exon 4449..4457 /note="EF-1a exon 2 leader" CDS 4554..5228 /note="dsRed-Express" CDS <5229..>5243 /note="artificial tail" mRNA 5287..>5875 /note="WPRE" polyA_signal 5911..6579 /note="hEF1a polyA signal" rep_origin 6580..7313 /note="MB1 Ori" promoter 7334..7380 /note="EM7 promoter" CDS 7401..7775 /note="Zeo" terminator 7776..7828 /note="terminator (rpmB/G)" BASE COUNT 2045 A 1780 C 1933 G 2070 T 0 OTHER ORIGIN - 1 CCCTGCATCA AGCTTGGTAC CGAGCTCGGA TCTAAATAAA CTTATAAATT GTGAGAGAAA 61 TTAATGAATG TCTAAGTTAA TGCAGAAACG GAGAGACATA CTATATTCAT GAACTAAAAG 121 ACTTAATATT GTGAAGGTAT ACTTTCTTTC CACATAAATT TGTAGTCAAT ATGTTCACCC 181 CAAAAAAGCT GTTTGTTAAC TTGCCAACCT CATTCTAAAA TGTATATAGA AGCCCAAAAG 241 ACAATAACAA AAATATTCTT GTAGAACAAA ATGGGAAAGA ATGTTCCACT AAATATCAAG 301 ATTTAGAGCA AAGCATGAGA TGTGTGGGGA TAGACAGTGA GGCTGATAAA ATAGAGTAGA 361 GCTCAGAAAC AGACCCATTG ATATATGTAA GTGACCTATG AAAAAAATAT GGCATTTTAC 421 AATGGGAAAA TGATGATCTT TTTCTTTTTT AGAAAAACAG GGAAATATAT TTATATGTAA 481 AAAATAAAAG GGAACCCATA TGTCATACCA TACACACAAA AAAATTCCAG TGAATTATAA 541 GTCTAAATGG AGAAGGCAAA ACTTTAAATC TTTTAGAAAA TAATATAGAA GCATGCCATC 601 ATGACTTCAG TGTAGAGAAA AATTTCTTAT GACTCAAAGT CCTAACCACA AAGAAAAGAT 661 TGTTAATTAG ATTGCATGAA TATTAAGACT TATTTTTAAA ATTAAAAAAC CATTAAGAAA 721 AGTCAGGCCA TAGAATGACA GAAAATATTT GCAACACCCC AGTAAAGAGA ATTGTAATAT 781 GCAGATTATA AAAAGAAGTC TTACAAATCA GTAAAAAATA AAACTAGACA AAAATTTGAA 841 CAGATGAAAG AGAAACTCTA AATAATCATT ACACATGAGA AACTCAATCT CAGAAATCAG 901 AGAACTATCA TTGCATATAC ACTAAATTAG AGAAATATTA AAAGGCTAAG TAACATCTGT 961 GGCAATATTG ATGGTATATA ACCTTGATAT GATGTGATGA GAACAGTACT TTACCCCATG 1021 GGCTTCCTCC CCAAACCCTT ACCCCAGTAT AAATCATGAC AAATATACTT TAAAAACCAT 1081 TACCCTATAT CTAACCAGTA CTCCTCAAAA CTGTCAAGGT CATCAAAAAT AAGAAAAGTC 1141 TGAGGAACTG TCAAAACTAA GAGGAACCCA AGGAGACATG AGAATTATAT GTAATGTGGC 1201 ATTCTGAATG AGATCCCAGA ACAGAAAAAG AACAGTAGCT AAAAAACTAA TGAAATATAA 1261 ATAAAGTTTG AACTTTAGTT TTTTTTAAAA AAGAGTAGCA TTAACACGGC AAAGCCATTT 1321 TCATATTTTT CTTGAACATT AAGTACAAGT CTATAATTAA AAATTTTTTA AATGTAGTCT 1381 GGAACATTGC CAGAAACAGA AGTACAGCAG CTATCTGTGC TGTCGCCTAA CTATCCATAG 1441 CTGATTGGTC TAAAATGAGA TACATCAACG CTCCTCCATG TTTTTTGTTT TCTTTTTAAA 1501 TGAAAAACTT TATTTTTTAA GAGGAGTTTC AGGTTCATAG CAAAATTGAG AGGAAGGTAC 1561 ATTCAAGCTG AGGAAGTTTT CCTCTATTCC TAGTTTACTG AGAGATTGCA TCATGAATGG 1621 GTGTTAAATT TTGTCAAATG CTTTTTCTGT GTCTATCAAT ATGACCATGT GATTTTCTTC 1681 TTTAACCTGT TGATGGGACA AATTACGTTA ATTGATTTTC AAACGTTGAA CCACCCTTAC 1741 ATATCTGGAA TAAATTCTAC TTGGTTGTGG TGTATATTTT TTGATACATT CTTGGATTCT 1801 TTTTGCTAAT ATTTTGTTGA AAATGTTTGT ATCTTTGTTC ATGAGAGATA TTGGTCTGTT 1861 GTTTTCTTTT CTTGTAATGT CATTTTCTAG TTCCGGTATT AAGGTAATGC TGGCCTAGTT 1921 GAATGATTTA GGAAGTATTC CCTCTGCTTC TGTCTTCTGA AAGAGATTGT AGAAAGTTGA 1981 TACAATTTTT TTTTCTTTAA ATATTTGATA GAATTCTGCA GGGCCTGAAA TAACCTCTGA 2041 AAGAGGAACT TGGTTAGGTA CCTGTGGAAT GTGTGTCAGT TAGGGTGTGG AAAGTCCCCA 2101 GGCTCCCCAG CAGGCAGAAG TATGCAAAGC ATGCATCTCA ATTAGTCAGC AACCAGGTGT 2161 GGAAAGTCCC CAGGCTCCCC AGCAGGCAGA AGTATGCAAA GCATGCATCT CAATTAGTCA 2221 GCAACCATAG TCCCGCCCCT AACTCCGCCC ATCCCGCCCC TAACTCCGCC CAGTTCCGCC 2281 CATTCTCCGC CCCATGGCTG ACTAATTTTT TTTATTTATA CAGAGGCCGA GGCCGCCTCG 2341 GCCTCTGAGC TATTCCAGAA GTAGTGAGGA GGCTTTTTTG GAGGCCTAGG CTTTTGCAAA 2401 AAGCTCCCGG GAGCTTGTAT ATCCATTTTC GGATCTGATC AGCACGTGTT GACAATTAAT 2461 CATCGGCATA GTATATCGGC ATAGTATAAT ACGACAAGGT GAGGAACTAA ATCATGAAGA 2521 CCTTCAACAT CTCTCAGCAG GATCTGGAGC TGGTGGAGGT CGCCACTGAG AAGATCACCA 2581 TGCTCTATGA GGACAACAAG CACCATGTCG GGGCGGCCAT CAGGACCAAG ACTGGGGAGA 2641 TCATCTCTGC TGTCCACATT GAGGCCTACA TTGGCAGGGT CACTGTCTGT GCTGAAGCCA 2701 TTGCCATTGG GTCTGCTGTG AGCAACGGGC AGAAGGACTT TGACACCATT GTGGCTGTCA 2761 GGCACCCCTA CTCTGATGAG GTGGACAGAT CCATCAGGGT GGTCAGCCCC TGTGGCATGT 2821 GCAGAGAGCT CATCTCTGAC TATGCTCCTG ACTGCTTTGT GCTCATTGAG ATGAATGGCA 2881 AGCTGGTCAA AACCACCATT GAGGAACTCA TCCCCCTCAA GTACACCAGG AACTAAACCT 2941 GAATTCGCTA GAGGGCCGCT TCGAGCAGAC ATGATAAGAT ACATTGATGA GTTTGGACAA 3001 ACCACAACTA GAATGCAGTG AAAAAAATGC TTTATTTGTG AAATTTGTGA TGCTATTGCT 3061 TTATTTGTAA CCATTATAAG CTGCAATAAA CAAGTTAACA ACAACAATTG CATTCATTTT 3121 ATGTTTCAGG TTCAGGGGGA GGTGTGGGAG GTTTTTTAAA GCAAGTAAAA CCTCTACAAA 3181 TGTGGTAAAA TCGATAAGGA TCCGGGCTGG CGTAATAGCG AAGAGGCCCG CACCGATCGC 3241 CCTTCCCAAC AGTTGCAGGT GGAGAAGAGC ATGCGTGAGG CTCCGGTGCC CGTCAGTGGG 3301 CAGAGCGCAC ATCGCCCACA GTCCCCGAGA AGTTGGGGGG AGGGGTCGGC AATTGAACCG 3361 GTGCCTAGAG AAGGTGGCGC GGGGTAAACT GGGAAAGTGA TGTCGTGTAC TGGCTCCGCC 3421 CTTTTCCCGA GGGTGGGGGA GAACCGTATA TAAGTGCAGT AGTCGCTGTG AACGTTCTTT 3481 TTCGCAACGG GTTTGCCGCC AGAACACAGG TAAGTGCCGT GTGTGGTTCC CGCGGGCCTG 3541 GCCTCTTTAC GGGTTATGGC CCTTGCGTGC CTTGAATTAC TTCCACCTGG CTGCAGTACG 3601 TGATTCTTGA TCCCGAGCTT CGGGTTGGAA GTGGGTGGGA GAGTTCGAGG CCTTGCGCTT 3661 AAGGAGCCCC TTCGCCTCGT GCTTGAGTTG AGGCCTGGCC TGGGCGCTGG GGCCGCCGCG 3721 TGCGAATCTG GTGGCACCTT CGCGCCTGTC TCGCTGCTTT CGATAAGTCT CTAGCCATTT 3781 AAAATTTTTG ATGACCTGCT GCGACGCTTT TTTTCTGGCA AGATAGTCTT GTAAATGCGG 3841 GCCAAGATCT GCACACTGGT ATTTCGGTTT TTGGGGCCGC GGGCGGCGAC GGGGCCCGTG 3901 CGTCCCAGCG CACATGTTCG GCGAGGCGGG GCCTGCGAGC GCGGCCACCG AGAATCGGAC 3961 GGGGGTAGTC TCAAGCTGGC CGGCCTGCTC TGGTGCCTGG CCTCGCGCCG CCGTGTATCG 4021 CCCCGCCCTG GGCGGCAAGG CTGGCCCGGT CGGCACCAGT TGCGTGAGCG GAAAGATGGC 4081 CGCTTCCCGG CCCTGCTGCA GGGAGCTCAA AATGGAGGAC GCGGCGCTCG GGAGAGCGGG 4141 CGGGTGAGTC ACCCACACAA AGGAAAAGGG CCTTTCCGTC CTCAGCCGTC GCTTCATGTG 4201 ACTCCACGGA GTACCGGGCG CCGTCCAGGC ACCTCGATTA GTTCTCGAGC TTTTGGAGTA 4261 CGTCGTCTTT AGGTTGGGGG GAGGGGTTTT ATGCGATGGA GTTTCCCCAC ACTGAGTGGG 4321 TGGAGACTGA AGTTAGGCCA GCTTGGCACT TGATGTAATT CTCCTTGGAA TTTGCCCTTT 4381 TTGAGTTTGG ATCTTGGTTC ATTCTCAAGC CTCAGACAGT GGTTCAAAGT TTTTTTCTTC 4441 CATTTCAGGT GTCGTGAGAA TTCTGTAGAG ATCCCTCGAC CTCGAGATCC ATTGTGCTGG 4501 ATCTGCGATC TAAGTAAGCT TCGAATTCTG CAGTCGAGCT ACCGGTCGCC ACCATGGCCT 4561 CCTCCGAGGA CGTCATCAAG GAGTTCATGC GCTTCAAGGT GCGCATGGAG GGCTCCGTGA 4621 ACGGCCACGA GTTCGAGATC GAGGGCGAGG GCGAGGGCCG CCCCTACGAG GGCACCCAGA 4681 CCGCCAAGCT GAAGGTGACC AAGGGCGGCC CCCTGCCCTT CGCCTGGGAC ATCCTGTCCC 4741 CCCAGTTCCA GTACGGCTCC AAGGTGTACG TGAAGCACCC CGCCGACATC CCCGACTACA 4801 AGAAGCTGTC CTTCCCCGAG GGCTTCAAGT GGGAGCGCGT GATGAACTTC GAGGACGGCG 4861 GCGTGGTGAC CGTGACCCAG GACTCCTCCC TGCAGGACGG CTCCTTCATC TACAAGGTGA 4921 AGTTCATCGG CGTGAACTTC CCCTCCGACG GCCCCGTAAT GCAGAAGAAG ACTATGGGCT 4981 GGGAGGCCTC CACCGAGCGC CTGTACCCCC GCGACGGCGT GCTGAAGGGC GAGATCCACA 5041 AGGCCCTGAA GCTGAAGGAC GGCGGCCACT ACCTGGTGGA GTTCAAGTCC ATCTACATGG 5101 CCAAGAAGCC CGTGCAGCTG CCCGGCTACT ACTACGTGGA CTCCAAGCTG GACATCACCT 5161 CCCACAACGA GGACTACACC ATCGTGGAGC AGTACGAGCG CGCCGAGGGC CGCCACCACC 5221 TGTTCCTGAG ATCTCGACAC TAGTGGATCC CCCGGGCTGC AGGAATTCGA TATCAAGCTT 5281 ATCGATAATC AACCTCTGGA TTACAAAATT TGTGAAAGAT TGACTGGTAT TCTTAACTAT 5341 GTTGCTCCTT TTACGCTATG TGGATACGCT GCTTTAATGC CTTTGTATCA TGCTATTGCT 5401 TCCCGTATGG CTTTCATTTT CTCCTCCTTG TATAAATCCT GGTTGCTGTC TCTTTATGAG 5461 GAGTTGTGGC CCGTTGTCAG GCAACGTGGC GTGGTGTGCA CTGTGTTTGC TGACGCAACC 5521 CCCACTGGTT GGGGCATTGC CACCACCTGT CAGCTCCTTT CCGGGACTTT CGCTTTCCCC 5581 CTCCCTATTG CCACGGCGGA ACTCATCGCC GCCTGCCTTG CCCGCTGCTG GACAGGGGCT 5641 CGGCTGTTGG GCACTGACAA TTCCGTGGTG TTGTCGGGGA AATCATCGTC CTTTCCTTGG 5701 CTGCTCGCCT GTGTTGCCAC CTGGATTCTG CGCGGGACGT CCTTCTGCTA CGTCCCTTCG 5761 GCCCTCAATC CAGCGGACCT TCCTTCCCGC GGCCTGCTGC CGGCTCTGCG GCCTCTTCCG 5821 CGTCTTCGCC TTCGCCCTCA GACGAGTCGG ATCTCCCTTT GGGCCGCCTC CCCGCATCGA 5881 TACCGTCGGC CCACTGCTCC CTAAACCTGA GCTAGCATTA TCCCTAATAC CTGCCACCCC 5941 ACTCTTAATC AGTGGTGGAA GAACGGTCTC AGAACTGTTT GTTTCAATTG GCCATTTAAG 6001 TTTAGTAGTA AAAGACTGGT TAATGATAAC AATGCATCGT AAAACCTTCA GAAGGAAAGG 6061 AGAATGTTTT GTGGACCACT TTGGTTTTCT TTTTTGCGTG TGGCAGTTTT AAGTTATTAG 6121 TTTTTAAAAT CAGTACTTTT TAATGGAAAC AACTTGACCA AAAATTTGTC ACAGAATTTT 6181 GAGACCCATT AAAAAAGTTA AATGAGAAAC CTGTGTGTTC CTTTGGTCAA CACCGAGACA 6241 TTTAGGTGAA AGACATCTAA TTCTGGTTTT ACGAATCTGG AAACTTCTTG AAAATGTAAT 6301 TCTTGAGTTA ACACTTCTGG GTGGAGAATA GGGTTGTTTT CCCCCCACAT AATTGGAAGG 6361 GGAAGGAATA TCATTTAAAG CTATGGGAGG GTTTCTTTGA TTACAACACT GGAGAGAAAT 6421 GCAGCATGTT GCTGATTGCC TGTCACTAAA ACAGGCCAAA AACTGAGTCC TTGGGTTGCA 6481 TAGAAAGCTT CATGTTGCTA AACCAATGTT AAGTGAATCT TTGGAAACAA AATGTTTCCA 6541 AATTACTGGG ATGTGCATGT TGAAACGTGG GTTAATTAAC TAGCCATGAC CAAAATCCCT 6601 TAACGTGAGT TTTCGTTCCA CTGAGCGTCA GACCCCGTAG AAAAGATCAA AGGATCTTCT 6661 TGAGATCCTT TTTTTCTGCG CGTAATCTGC TGCTTGCAAA CAAAAAAACC ACCGCTACCA 6721 GCGGTGGTTT GTTTGCCGGA TCAAGAGCTA CCAACTCTTT TTCCGAAGGT AACTGGCTTC 6781 AGCAGAGCGC AGATACCAAA TACTGTTCTT CTAGTGTAGC CGTAGTTAGG CCACCACTTC 6841 AAGAACTCTG TAGCACCGCC TACATACCTC GCTCTGCTAA TCCTGTTACC AGTGGCTGCT 6901 GCCAGTGGCG ATAAGTCGTG TCTTACCGGG TTGGACTCAA GACGATAGTT ACCGGATAAG 6961 GCGCAGCGGT CGGGCTGAAC GGGGGGTTCG TGCACACAGC CCAGCTTGGA GCGAACGACC 7021 TACACCGAAC TGAGATACCT ACAGCGTGAG CTATGAGAAA GCGCCACGCT TCCCGAAGGG 7081 AGAAAGGCGG ACAGGTATCC GGTAAGCGGC AGGGTCGGAA CAGGAGAGCG CACGAGGGAG 7141 CTTCCAGGGG GAAACGCCTG GTATCTTTAT AGTCCTGTCG GGTTTCGCCA CCTCTGACTT 7201 GAGCGTCGAT TTTTGTGATG CTCGTCAGGG GGGCGGAGCC TATGGAAAAA CGCCAGCAAC 7261 GCGGCCTTTT TACGGTTCCT GGCCTTTTGC TGGCCTTTTG CTCACATGTT CTTAATTAAA 7321 TTTTTCAAAA GTAGTTGACA ATTAATCATC GGCATAGTAT ATCGGCATAG TATAATACGA 7381 CTCACTATAG GAGGGCCATC ATGGCCAAGT TGACCAGTGC TGTCCCAGTG CTCACAGCCA 7441 GGGATGTGGC TGGAGCTGTT GAGTTCTGGA CTGACAGGTT GGGGTTCTCC AGAGATTTTG 7501 TGGAGGATGA CTTTGCAGGT GTGGTCAGAG ATGATGTCAC CCTGTTCATC TCAGCAGTCC 7561 AGGACCAGGT GGTGCCTGAC AACACCCTGG CTTGGGTGTG GGTGAGAGGA CTGGATGAGC 7621 TGTATGCTGA GTGGAGTGAG GTGGTCTCCA CCAACTTCAG GGATGCCAGT GGCCCTGCCA 7681 TGACAGAGAT TGGAGAGCAG CCCTGGGGGA GAGAGTTTGC CCTGAGAGAC CCAGCAGGCA 7741 ACTGTGTGCA CTTTGTGGCA GAGGAGCAGG ACTGAGGATA AGAATTGTAA CAAAAAACCC 7801 CGCCCCGGCG GGGTTTTTTG TTAATTAA //