LOCUS pe2VP1 6481 bp ss-DNA circular SYN 17-JUN-2003 DEFINITION - ACCESSION - KEYWORDS - SOURCE - FEATURES Location/Qualifiers enhancer 71..213 /note=SV40 enhancer elements rep_origin 238..>373 /note=SV40 Ori mutation 307..307 /note=G->A kills SELP ATG CDS 418..1137 /note=EGFP polyA_signal 1153..>1374 /note=SV40 Late PolyA promoter <1465..2643 /note=EF1a promoter and UTR exon 1663..1695 /note=EF-1a exon 1 intron 1696..2635 /note=EF-1a intron A exon 2635..2643 /note=EF-1a exon 2 leader insertion_seq 2667..2691 /note=attB1 CDS 2704..3846 /note=HPyV7 VP1 (codmod) insertion_seq <3854..3878 /note=attB2 mRNA 3940..>4528 /note=WPRE polyA_signal 4564..5232 /note=hEF1a polyA signal rep_origin 5233..5966 /note=MB1 Ori promoter 5967..6053 /note=EM7 promoter CDS 6054..6428 /note=Zeo resistance terminator 6429..6481 /note=terminator (rpmB/G) BASE COUNT 1462 A 1764 C 1768 G 1487 T 0 OTHER ORIGIN ? 1 CCCTGCAGGG CCTGAAATAA CCTCTGAAAG AGGAACTTGG TTAGGTACCT GTGGAATGTG 61 TGTCAGTTAG GGTGTGGAAA GTCCCCAGGC TCCCCAGCAG GCAGAAGTAT GCAAAGCATG 121 CATCTCAATT AGTCAGCAAC CAGGTGTGGA AAGTCCCCAG GCTCCCCAGC AGGCAGAAGT 181 ATGCAAAGCA TGCATCTCAA TTAGTCAGCA ACCATAGTCC CGCCCCTAAC TCCGCCCATC 241 CCGCCCCTAA CTCCGCCCAG TTCCGCCCAT TCTCCGCCCC ATGGCTGACT AATTTTTTTT 301 ATTTATACAG AGGCCGAGGC CGCCTCGGCC TCTGAGCTAT TCCAGAAGTA GTGAGGAGGC 361 TTTTTTGGAG GCCTAGGCTT TTGCAAAAAG CTTGATTGGG ATCCACCGGT CGCCACCATG 421 GTGAGCAAGG GCGAGGAGCT GTTCACCGGG GTGGTGCCCA TCCTGGTCGA GCTGGACGGC 481 GACGTAAACG GCCACAAGTT CAGCGTGTCC GGCGAGGGCG AGGGCGATGC CACCTACGGC 541 AAGCTGACCC TGAAGTTCAT CTGCACCACC GGCAAGCTGC CCGTGCCCTG GCCCACCCTC 601 GTGACCACCC TGACCTACGG CGTGCAGTGC TTCAGCCGCT ACCCCGACCA CATGAAGCAG 661 CACGACTTCT TCAAGTCCGC CATGCCCGAA GGCTACGTCC AGGAGCGCAC CATCTTCTTC 721 AAGGACGACG GCAACTACAA GACCCGCGCC GAGGTGAAGT TCGAGGGCGA CACCCTGGTG 781 AACCGCATCG AGCTGAAGGG CATCGACTTC AAGGAGGACG GCAACATCCT GGGGCACAAG 841 CTGGAGTACA ACTACAACAG CCACAACGTC TATATCATGG CCGACAAGCA GAAGAACGGC 901 ATCAAGGTGA ACTTCAAGAT CCGCCACAAC ATCGAGGACG GCAGCGTGCA GCTCGCCGAC 961 CACTACCAGC AGAACACCCC CATCGGCGAC GGCCCCGTGC TGCTGCCCGA CAACCACTAC 1021 CTGAGCACCC AGTCCGCCCT GAGCAAAGAC CCCAACGAGA AGCGCGATCA CATGGTCCTG 1081 CTGGAGTTCG TGACCGCCGC CGGGATCACT CTCGGCATGG ACGAGCTGTA CAAGTAAAGC 1141 GGCCGCTTCG AGCAGACATG ATAAGATACA TTGATGAGTT TGGACAAACC ACAACTAGAA 1201 TGCAGTGAAA AAAATGCTTT ATTTGTGAAA TTTGTGATGC TATTGCTTTA TTTGTAACCA 1261 TTATAAGCTG CAATAAACAA GTTAACAACA ACAATTGCAT TCATTTTATG TTTCAGGTTC 1321 AGGGGGAGGT GTGGGAGGTT TTTTAAAGCA AGTAAAACCT CTACAAATGT GGTAAAATCG 1381 ATAAGGATCC GGGCTGGCGT AATAGCGAAG AGGCCCGCAC CGATCGCCCT TCCCAACAGT 1441 TGCGGTGGAG AAGAGCATGC GTGAGGCTCC GGTGCCCGTC AGTGGGCAGA GCGCACATCG 1501 CCCACAGTCC CCGAGAAGTT GGGGGGAGGG GTCGGCAATT GAACCGGTGC CTAGAGAAGG 1561 TGGCGCGGGG TAAACTGGGA AAGTGATGTC GTGTACTGGC TCCGCCCTTT TCCCGAGGGT 1621 GGGGGAGAAC CGTATATAAG TGCAGTAGTC GCTGTGAACG TTCTTTTTCG CAACGGGTTT 1681 GCCGCCAGAA CACAGGTAAG TGCCGTGTGT GGTTCCCGCG GGCCTGGCCT CTTTACGGGT 1741 TATGGCCCTT GCGTGCCTTG AATTACTTCC ACCTGGCTGC AGTACGTGAT TCTTGATCCC 1801 GAGCTTCGGG TTGGAAGTGG GTGGGAGAGT TCGAGGCCTT GCGCTTAAGG AGCCCCTTCG 1861 CCTCGTGCTT GAGTTGAGGC CTGGCCTGGG CGCTGGGGCC GCCGCGTGCG AATCTGGTGG 1921 CACCTTCGCG CCTGTCTCGC TGCTTTCGAT AAGTCTCTAG CCATTTAAAA TTTTTGATGA 1981 CCTGCTGCGA CGCTTTTTTT CTGGCAAGAT AGTCTTGTAA ATGCGGGCCA AGATCTGCAC 2041 ACTGGTATTT CGGTTTTTGG GGCCGCGGGC GGCGACGGGG CCCGTGCGTC CCAGCGCACA 2101 TGTTCGGCGA GGCGGGGCCT GCGAGCGCGG CCACCGAGAA TCGGACGGGG GTAGTCTCAA 2161 GCTGGCCGGC CTGCTCTGGT GCCTGGCCTC GCGCCGCCGT GTATCGCCCC GCCCTGGGCG 2221 GCAAGGCTGG CCCGGTCGGC ACCAGTTGCG TGAGCGGAAA GATGGCCGCT TCCCGGCCCT 2281 GCTGCAGGGA GCTCAAAATG GAGGACGCGG CGCTCGGGAG AGCGGGCGGG TGAGTCACCC 2341 ACACAAAGGA AAAGGGCCTT TCCGTCCTCA GCCGTCGCTT CATGTGACTC CACGGAGTAC 2401 CGGGCGCCGT CCAGGCACCT CGATTAGTTC TCGAGCTTTT GGAGTACGTC GTCTTTAGGT 2461 TGGGGGGAGG GGTTTTATGC GATGGAGTTT CCCCACACTG AGTGGGTGGA GACTGAAGTT 2521 AGGCCAGCTT GGCACTTGAT GTAATTCTCC TTGGAATTTG CCCTTTTTGA GTTTGGATCT 2581 TGGTTCATTC TCAAGCCTCA GACAGTGGTT CAAAGTTTTT TTCTTCCATT TCAGGTGTCG 2641 TGAGGAATTC TCTAGAGCTT GATCAAACAA GTTTGTACAA AAAAGCAGGC TTCCGGAGCC 2701 ACCATGCCAT GCCAGCGCAA GGGCAACGGC CCAACCCAGA AGCTGCCACG CGTCATCCGC 2761 AAGGGAGGCG TCGAGGTCCT CGACACCGTG CCCCTGACCG AAGATACCCA GTACAAGGTC 2821 GAGGCCGTCC TGCTGCCTAA CTTCGGCAAG GCAGCCACTA CCGGAAACTT CCAAAGCCGC 2881 GGACTGCCCT ACACCATGTC CGATACCCTC GGCCCTGGCG CTGCCCTGTG CTATAGCGTC 2941 GCCGTCATCA ACCTGCCCGA GATCCCCGAC GCAATGTGCG AAGATACCAT GATCGTCTGG 3001 GAAGCATACC GCCTCGAGAC CGAGCTGCTG TTCGCACCTC AGATGGCATC CAGCGGATAC 3061 CAGCGCGCTA ACGGAACACT CGCTGGCATC GAAGGATCCC AGCTGTACTT CTGGGCATGC 3121 GGAGGAGGTC CACTCGACGT GATCGGCATC AATCCCGATC CCGAGCGCCT GAAAGTGAAC 3181 GAGGCACTCG AGGGCCCAGG AAACACCGAC GTGGCGTCCC TGCAAGCACT GCGCAAGCAG 3241 GTCAACGCTG CCAACTTTCC GGTTGAACTG TGGGTCGCCG ACCCAACCAA GAACGACAAC 3301 ACACGCTACT TCGGACGCGT CGTCGGCGGA GGCGTGACAC CGCCCGTCGT CAGTTACGGC 3361 AACCAGTCCA CAACCCCACT CATCGACGAG AACGGCGTCG GCATCCTGTG CACCTTCGGC 3421 TCCGTCTACC TGACATCCGC CGACATGGTC GGCATGACCG GGCTGCCAGG ACTCCCAACC 3481 CTGTCCGCCG ATTACTCCAA TCAGCGCACC GTGCAGGCAG GCTACGGCCG GTTCTTCCGC 3541 GTGCACTGTC GCCAGCGCCG CATCAAGCAT CCATACACCG TCGACATGAT GTTCCGCCAG 3601 TTCCTGCAAC CACAGAAGCC TCAGGTCCAG GGACAGCAGC CTGCCGCTGT GCAGGAGGTC 3661 ACCATGGAAC AGATGCAACC AGCAACCATC CCGCCAACTG TCGAAGGAGG CCTCGGATTC 3721 GCCCCAACAT CCAAGTTCCT GATTCAGAAC GGCGAACTGA TCTACCCATC CAGCAACGCA 3781 GCTGCTGCGG CTGCAAAGAT CAGCGTGGCA CCCAAGAAGA ATACCGACAA CAAGAAGGAG 3841 CTCTGAGACT AGTACCCAGC TTTCTTGTAC AAAGTGGTTC GATCTAGAAT GGCTAGTGGA 3901 TCCCCCGGGC TGCAGGAATT CGATATCAAG CTTATCGATA ATCAACCTCT GGATTACAAA 3961 ATTTGTGAAA GATTGACTGG TATTCTTAAC TATGTTGCTC CTTTTACGCT ATGTGGATAC 4021 GCTGCTTTAA TGCCTTTGTA TCATGCTATT GCTTCCCGTA TGGCTTTCAT TTTCTCCTCC 4081 TTGTATAAAT CCTGGTTGCT GTCTCTTTAT GAGGAGTTGT GGCCCGTTGT CAGGCAACGT 4141 GGCGTGGTGT GCACTGTGTT TGCTGACGCA ACCCCCACTG GTTGGGGCAT TGCCACCACC 4201 TGTCAGCTCC TTTCCGGGAC TTTCGCTTTC CCCCTCCCTA TTGCCACGGC GGAACTCATC 4261 GCCGCCTGCC TTGCCCGCTG CTGGACAGGG GCTCGGCTGT TGGGCACTGA CAATTCCGTG 4321 GTGTTGTCGG GGAAATCATC GTCCTTTCCT TGGCTGCTCG CCTGTGTTGC CACCTGGATT 4381 CTGCGCGGGA CGTCCTTCTG CTACGTCCCT TCGGCCCTCA ATCCAGCGGA CCTTCCTTCC 4441 CGCGGCCTGC TGCCGGCTCT GCGGCCTCTT CCGCGTCTTC GCCTTCGCCC TCAGACGAGT 4501 CGGATCTCCC TTTGGGCCGC CTCCCCGCAT CGATACCGTC GGCCCACTGC TCCCTAAACC 4561 TGAGCTAGCA TTATCCCTAA TACCTGCCAC CCCACTCTTA ATCAGTGGTG GAAGAACGGT 4621 CTCAGAACTG TTTGTTTCAA TTGGCCATTT AAGTTTAGTA GTAAAAGACT GGTTAATGAT 4681 AACAATGCAT CGTAAAACCT TCAGAAGGAA AGGAGAATGT TTTGTGGACC ACTTTGGTTT 4741 TCTTTTTTGC GTGTGGCAGT TTTAAGTTAT TAGTTTTTAA AATCAGTACT TTTTAATGGA 4801 AACAACTTGA CCAAAAATTT GTCACAGAAT TTTGAGACCC ATTAAAAAAG TTAAATGAGA 4861 AACCTGTGTG TTCCTTTGGT CAACACCGAG ACATTTAGGT GAAAGACATC TAATTCTGGT 4921 TTTACGAATC TGGAAACTTC TTGAAAATGT AATTCTTGAG TTAACACTTC TGGGTGGAGA 4981 ATAGGGTTGT TTTCCCCCCA CATAATTGGA AGGGGAAGGA ATATCATTTA AAGCTATGGG 5041 AGGGTTTCTT TGATTACAAC ACTGGAGAGA AATGCAGCAT GTTGCTGATT GCCTGTCACT 5101 AAAACAGGCC AAAAACTGAG TCCTTGGGTT GCATAGAAAG CTTCATGTTG CTAAACCAAT 5161 GTTAAGTGAA TCTTTGGAAA CAAAATGTTT CCAAATTACT GGGATGTGCA TGTTGAAACG 5221 TGGGTTAATT AACTAGCCAT GACCAAAATC CCTTAACGTG AGTTTTCGTT CCACTGAGCG 5281 TCAGACCCCG TAGAAAAGAT CAAAGGATCT TCTTGAGATC CTTTTTTTCT GCGCGTAATC 5341 TGCTGCTTGC AAACAAAAAA ACCACCGCTA CCAGCGGTGG TTTGTTTGCC GGATCAAGAG 5401 CTACCAACTC TTTTTCCGAA GGTAACTGGC TTCAGCAGAG CGCAGATACC AAATACTGTT 5461 CTTCTAGTGT AGCCGTAGTT AGGCCACCAC TTCAAGAACT CTGTAGCACC GCCTACATAC 5521 CTCGCTCTGC TAATCCTGTT ACCAGTGGCT GCTGCCAGTG GCGATAAGTC GTGTCTTACC 5581 GGGTTGGACT CAAGACGATA GTTACCGGAT AAGGCGCAGC GGTCGGGCTG AACGGGGGGT 5641 TCGTGCACAC AGCCCAGCTT GGAGCGAACG ACCTACACCG AACTGAGATA CCTACAGCGT 5701 GAGCTATGAG AAAGCGCCAC GCTTCCCGAA GGGAGAAAGG CGGACAGGTA TCCGGTAAGC 5761 GGCAGGGTCG GAACAGGAGA GCGCACGAGG GAGCTTCCAG GGGGAAACGC CTGGTATCTT 5821 TATAGTCCTG TCGGGTTTCG CCACCTCTGA CTTGAGCGTC GATTTTTGTG ATGCTCGTCA 5881 GGGGGGCGGA GCCTATGGAA AAACGCCAGC AACGCGGCCT TTTTACGGTT CCTGGCCTTT 5941 TGCTGGCCTT TTGCTCACAT GTTCTTAATT AAATTTTTCA AAAGTAGTTG ACAATTAATC 6001 ATCGGCATAG TATATCGGCA TAGTATAATA CGACTCACTA TAGGAGGGCC ATCATGGCCA 6061 AGTTGACCAG TGCTGTCCCA GTGCTCACAG CCAGGGATGT GGCTGGAGCT GTTGAGTTCT 6121 GGACTGACAG GTTGGGGTTC TCCAGAGATT TTGTGGAGGA TGACTTTGCA GGTGTGGTCA 6181 GAGATGATGT CACCCTGTTC ATCTCAGCAG TCCAGGACCA GGTGGTGCCT GACAACACCC 6241 TGGCTTGGGT GTGGGTGAGA GGACTGGATG AGCTGTATGC TGAGTGGAGT GAGGTGGTCT 6301 CCACCAACTT CAGGGATGCC AGTGGCCCTG CCATGACAGA GATTGGAGAG CAGCCCTGGG 6361 GGAGAGAGTT TGCCCTGAGA GACCCAGCAG GCAACTGTGT GCACTTTGTG GCAGAGGAGC 6421 AGGACTGAGG ATAAGAATTG TAACAAAAAA CCCCGCCCCG GCGGGGTTTT TTGTTAATTA 6481 A //