LOCUS P16L2H.TXT 5685 BP DS-DNA CIRCULAR SYN 27-MAR-2002 DEFINITION - ACCESSION - KEYWORDS - SOURCE - FEATURES Location/Qualifiers LTR 1..167 /note="AAV ITR" promoter 180..708 /note="CMV promoter" misc_feature 800..859 /note="SV40 homology" intron 827..921 /note="SV40 late intron" misc_feature 870..956 /note="SV40 homology" CDS 991..>2412 /note="Muller's HPV16 L2" polyA_signal 2465..2676 /note="BGH pA" LTR 2679..2845 /note="AAV ITR" rep_origin 3032..3705 /note="ColE1 Ori" CDS complement(3850..4710) /note="AmpR" rep_origin 5147..5603 /note="F1 Ori" BASE COUNT 1351 A 1699 C 1470 G 1165 T 0 OTHER ORIGIN - 1 GGGGGGGGGG GGGGGGGGGG CCACTCCCTC TCTGCGCGCT CGCTCGCTCA CTGAGGCCGG 61 GCGACCAAAG GTCGCCCGAC GCCCGGGCTT TGCCCGGGCG GCCTCAGTGA GCGAGCGAGC 121 GCGCAGAGAG GGAGTGGCCA ACTCCATCAC TAGGGGTTCC TAGATCTGAA TTCGGTACCC 181 GTTACATAAC TTACGGTAAA TGGCCCGCCT GGCTGACCGC CCAACGACCC CCGCCCATTG 241 ACGTCAATAA TGACGTATGT TCCCATAGTA ACGCCAATAG GGACTTTCCA TTGACGTCAA 301 TGGGTGGAGT ATTTACGGTA AACTGCCCAC TTGGCAGTAC ATCAAGTGTA TCATATGCCA 361 AGTACGCCCC CTATTGACGT CAATGACGGT AAATGGCCCG CCTGGCATTA TGCCCAGTAC 421 ATGACCTTAT GGGACTTTCC TACTTGGCAG TACATCTACG TATTAGTCAT CGCTATTACC 481 ATGGTGATGC GGTTTTGGCA GTACATCAAT GGGCGTGGAT AGCGGTTTGA CTCACGGGGA 541 TTTCCAAGTC TCCACCCCAT TGACGTCAAT GGGAGTTTGT TTTGGCACCA AAATCAACGG 601 GACTTTCCAA AATGTCGTAA CAACTCCGCC CCATTGACGC AAATGGGCGG TAGGCGTGTA 661 CGGTGGGAGG TCTATATAAG CAGAGCTCGT TTAGTGAACC GTCAGATCGC CTGGAGACGC 721 CATCCACGCT GTTTTGACCT CCATAGAAGA CACCGGGACC GATCCAGCCT CCGGACTCTA 781 GAGGATCCGG TACTCGAGGA ACTGAAAAAC CAGAAAGTTA ACTGGTAAGT TTAGTCTTTT 841 TGTCTTTTAT TTCAGGTCCC GGATCCGGTG GTGGTGCAAA TCAAAGAACT GCTCCTCAGT 901 GGATGTTGCC TTTACTTCTA GGCCTGTACG GAAGTGTTAC TTCTGCTCTA AAAGCTGCGG 961 AATTGTACCC GCGGCCGCTC TAGAGCCACC ATGAGGCACA AGAGGAGCGC CAAGAGGACC 1021 AAGAGGGCCA GCGCCACCCA GCTGTACAAG ACCTGCAAGC AGGCCGGCAC CTGCCCCCCC 1081 GACATCATCC CCAAGGTGGA GGGCAAGACC ATCGCCGACC AGATCCTGCA GTACGGCAGC 1141 ATGGGCGTGT TCTTCGGCGG CCTGGGCATC GGCACCGGCA GCGGCACCGG CGGCAGGACC 1201 GGCTACATCC CCCTGGGCAC CAGGCCCCCC ACCGCCACCG ACACCCTGGC CCCCGTGAGG 1261 CCCCCCCTGA CCGTGGACCC CGTGGGCCCC AGCGACCCCA GCATCGTGAG CCTGGTGGAG 1321 GAGACCAGCT TCATCGACGC CGGCGCCCCC ACCAGCGTGC CCAGCATCCC CCCCGACGTG 1381 AGCGGCTTCA GCATCACCAC CAGCACCGAC ACCACCCCCG CCATCCTGGA CATCAACAAC 1441 ACCGTGACCA CCGTGACCAC CCACAACAAC CCCACCTTCA CCGACCCCAG CGTGCTGCAG 1501 CCCCCCACCC CCGCCGAGAC CGGCGGCCAC TTCACCCTGA GCAGCAGCAC CATCAGCACC 1561 CACAACTACG AGGAGATCCC CATGGACACC TTCATCGTGA GCACCAACCC CAACACCGTG 1621 ACCAGCAGCA CCCCCATCCC CGGCAGCAGG CCCGTGGCCA GGCTGGGCCT GTACAGCAGG 1681 ACCACCCAGC AGGTGAAGGT GGTGGACCCC GCCTTCGTGA CCACCCCCAC CAAGCTGATC 1741 ACCTACGACA ACCCCGCCTA CGAGGGCATC GACGTGGACA ACACCCTGTA CTTCAGCAGC 1801 AACGACAACA GCATCAACAT CGCCCCCGAC CCCGACTTCC TGGACATCGT GGCCCTGCAC 1861 AGGCCCGCCC TGACCAGCAG GAGGACCGGC ATCAGGTACA GCAGGATCGG CAACAAGCAG 1921 ACCCTGAGGA CCAGGAGCGG CAAGAGCATC GGCGCCAAGG TGCACTACTA CTACGACCTG 1981 AGCACCATCG ACCCCGCCGA GGAGATCGAG CTGCAGACCA TCACCCCCAG CACCTACACC 2041 ACCACCAGCC ACGCCGCCAG CCCCACCAGC ATCAACAACG GCCTGTACGA CATCTACGCC 2101 GACGACTTCA TCACCGACAC CAGCACCACC CCCGTGCCCA GCGTGCCCAG CACCAGCCTG 2161 AGCGGCTACA TCCCCGCCAA CACCACCATC CCCTTCGGTG GCGCCTACAA CATCCCCCTG 2221 GTGAGCGGCC CCGACATCCC CATCAACATC ACCGACCAGG CCCCCAGCCT GATCCCCATC 2281 GTGCCCGGCA GCCCCCAGTA CACCATCATC GCCGACGCCG GCGACTTCTA CCTGCACCCC 2341 AGCTACTACA TGCTGAGGAA GAGGAGGAAG AGGCTGCCCT ACTTCTTCAG CGACGTGAGC 2401 CTGGCCGCCT GAAAGCTTTT TGAATTCTTT GGATCCACTA GTGTCGACTA GAGCTCGCTG 2461 ATCAGCCTCG ACTGTGCCTT CTAGTTGCCA GCCATCTGTT GTTTGCCCCT CCCCCGTGCC 2521 TTCCTTGACC CTGGAAGGTG CCACTCCCAC TGTCCCCTAA TAAAATGAGG AAATTGCATC 2581 GCATTGTCTG AGTAGGTGTC ATTCTATTCT GGGGGGTGGG GTGGGGCAGG ACAGCAAGGG 2641 GGAGGATTGG GAAGACAATA GCAGGCATGC TGGGGAGAGA TCTAGGAACC CCTAGTGATG 2701 GAGTTGGCCA CTCCCTCTCT GCGCGCTCGC TCGCTCACTG AGGCCGCCCG GGCAAAGCCC 2761 GGGCGTCGGG CGACCTTTGG TCGCCCGGCC TCAGTGAGCG AGCGAGCGCG CAGAGAGGGA 2821 GTGGCCCCCC CCCCCCCCCC CCCCTGCAGC CCAGCTGCAT TAATGAATCG GCCAACGCGC 2881 GGGGAGAGGC GGTTTGCGTA TTGGGCGCTC TTCCGCTTCC TCGCTCACTG ACTCGCTGCG 2941 CTCGGTCGTT CGGCTGCGGC GAGCGGTATC AGCTCACTCA AAGGCGGTAA TACGGTTATC 3001 CACAGAATCA GGGGATAACG CAGGAAAGAA CATGTGAGCA AAAGGCCAGC AAAAGGCCAG 3061 GAACCGTAAA AAGGCCGCGT TGCTGGCGTT TTTCCATAGG CTCCGCCCCC CTGACGAGCA 3121 TCACAAAAAT CGACGCTCAA GTCAGAGGTG GCGAAACCCG ACAGGACTAT AAAGATACCA 3181 GGCGTTTCCC CCTGGAAGCT CCCTCGTGCG CTCTCCTGTT CCGACCCTGC CGCTTACCGG 3241 ATACCTGTCC GCCTTTCTCC CTTCGGGAAG CGTGGCGCTT TCTCAATGCT CACGCTGTAG 3301 GTATCTCAGT TCGGTGTAGG TCGTTCGCTC CAAGCTGGGC TGTGTGCACG AACCCCCCGT 3361 TCAGCCCGAC CGCTGCGCCT TATCCGGTAA CTATCGTCTT GAGTCCAACC CGGTAAGACA 3421 CGACTTATCG CCACTGGCAG CAGCCACTGG TAACAGGATT AGCAGAGCGA GGTATGTAGG 3481 CGGTGCTACA GAGTTCTTGA AGTGGTGGCC TAACTACGGC TACACTAGAA GGACAGTATT 3541 TGGTATCTGC GCTCTGCTGA AGCCAGTTAC CTTCGGAAAA AGAGTTGGTA GCTCTTGATC 3601 CGGCAAACAA ACCACCGCTG GTAGCGGTGG TTTTTTTGTT TGCAAGCAGC AGATTACGCG 3661 CAGAAAAAAA GGATCTCAAG AAGATCCTTT GATCTTTTCT ACGGGGTCTG ACGCTCAGTG 3721 GAACGAAAAC TCACGTTAAG GGATTTTGGT CATGAGATTA TCAAAAAGGA TCTTCACCTA 3781 GATCCTTTTA AATTAAAAAT GAAGTTTTAA ATCAATCTAA AGTATATATG AGTAAACTTG 3841 GTCTGACAGT TACCAATGCT TAATCAGTGA GGCACCTATC TCAGCGATCT GTCTATTTCG 3901 TTCATCCATA GTTGCCTGAC TCCCCGTCGT GTAGATAACT ACGATACGGG AGGGCTTACC 3961 ATCTGGCCCC AGTGCTGCAA TGATACCGCG AGACCCACGC TCACCGGCTC CAGATTTATC 4021 AGCAATAAAC CAGCCAGCCG GAAGGGCCGA GCGCAGAAGT GGTCCTGCAA CTTTATCCGC 4081 CTCCATCCAG TCTATTAATT GTTGCCGGGA AGCTAGAGTA AGTAGTTCGC CAGTTAATAG 4141 TTTGCGCAAC GTTGTTGCCA TTGCTACAGG CATCGTGGTG TCACGCTCGT CGTTTGGTAT 4201 GGCTTCATTC AGCTCCGGTT CCCAACGATC AAGGCGAGTT ACATGATCCC CCATGTTGTG 4261 CAAAAAAGCG GTTAGCTCCT TCGGTCCTCC GATCGTTGTC AGAAGTAAGT TGGCCGCAGT 4321 GTTATCACTC ATGGTTATGG CAGCACTGCA TAATTCTCTT ACTGTCATGC CATCCGTAAG 4381 ATGCTTTTCT GTGACTGGTG AGTACTCAAC CAAGTCATTC TGAGAATAGT GTATGCGGCG 4441 ACCGAGTTGC TCTTGCCCGG CGTCAATACG GGATAATACC GCGCCACATA GCAGAACTTT 4501 AAAAGTGCTC ATCATTGGAA AACGTTCTTC GGGGCGAAAA CTCTCAAGGA TCTTACCGCT 4561 GTTGAGATCC AGTTCGATGT AACCCACTCG TGCACCCAAC TGATCTTCAG CATCTTTTAC 4621 TTTCACCAGC GTTTCTGGGT GAGCAAAAAC AGGAAGGCAA AATGCCGCAA AAAAGGGAAT 4681 AAGGGCGACA CGGAAATGTT GAATACTCAT ACTCTTCCTT TTTCAATATT ATTGAAGCAT 4741 TTATCAGGGT TATTGTCTCA TGAGCGGATA CATATTTGAA TGTATTTAGA AAAATAAACA 4801 AATAGGGGTT CCGCGCACAT TTCCCCGAAA AGTGCCACCT GACGTCTAAG AAACCATTAT 4861 TATCATGACA TTAACCTATA AAAATAGGCG TATCACGAGG CCCTTTCGTC TCGCGCGTTT 4921 CGGTGATGAC GGTGAAAACC TCTGACACAT GCAGCTCCCG GAGACGGTCA CAGCTTGTCT 4981 GTAAGCGGAT GCCGGGAGCA GACAAGCCCG TCAGGGCGCG TCAGCGGGTG TTGGCGGGTG 5041 TCGGGGCTGG CTTAACTATG CGGCATCAGA GCAGATTGTA CTGAGAGTGC ACCATATGCG 5101 GTGTGAAATA CCGCACAGAT GCGTAAGGAG AAAATACCGC ATCAGGAAAT TGTAAACGTT 5161 AATATTTTGT TAAAATTCGC GTTAAATTTT TGTTAAATCA GCTCATTTTT TAACCAATAG 5221 GCCGAAATCG GCAAAATCCC TTATAAATCA AAAGAATAGA CCGAGATAGG GTTGAGTGTT 5281 GTTCCAGTTT GGAACAAGAG TCCACTATTA AAGAACGTGG ACTCCAACGT CAAAGGGCGA 5341 AAAACCGTCT ATCAGGGCGA TGGCCCACTA CGTGAACCAT CACCCTAATC AAGTTTTTTG 5401 GGGTCGAGGT GCCGTAAAGC ACTAAATCGG AACCCTAAAG GGAGCCCCCG ATTTAGAGCT 5461 TGACGGGGAA AGCCGGCGAA CGTGGCGAGA AAGGAAGGGA AGAAAGCGAA AGGAGCGGGC 5521 GCTAGGGCGC TGGCAAGTGT AGCGGTCACG CTGCGCGTAA CCACCACACC CGCCGCGCTT 5581 AATGCGCCGC TACAGGGCGC GTCGCGCCAT TCGCCATTCA GGCTACGCAA CTGTTGGGAA 5641 GGGCGATCGG TGCGGGCCTC TTCGCTATTA CGCCAGCTGG CTGCA //