LOCUS P16L1H.GB 5781 BP DS-DNA CIRCULAR SYN 06-DEC-2002 DEFINITION - ACCESSION - KEYWORDS - SOURCE - FEATURES Location/Qualifiers repeat_region 1..167 /note="AAV ITR" promoter 180..708 /note="CMV promoter" misc_feature 800..956 /note="SV40 homology" intron 827..921 /note="SV40 late intron" CDS 991..2508 /note="Müller's L1" polyA_signal 2561..2772 /note="BGH pA" repeat_region complement(2775..2941) /note="AAV ITR" rep_origin 3128..3801 /note="ColE1 Ori" CDS complement(3946..4806) /note="AmpR" rep_origin 5243..5699 /note="F1 Ori" BASE COUNT 1377 A 1639 C 1558 G 1207 T 0 OTHER ORIGIN - 1 GGGGGGGGGG GGGGGGGGGG CCACTCCCTC TCTGCGCGCT CGCTCGCTCA CTGAGGCCGG 61 GCGACCAAAG GTCGCCCGAC GCCCGGGCTT TGCCCGGGCG GCCTCAGTGA GCGAGCGAGC 121 GCGCAGAGAG GGAGTGGCCA ACTCCATCAC TAGGGGTTCC TAGATCTGAA TTCGGTACCC 181 GTTACATAAC TTACGGTAAA TGGCCCGCCT GGCTGACCGC CCAACGACCC CCGCCCATTG 241 ACGTCAATAA TGACGTATGT TCCCATAGTA ACGCCAATAG GGACTTTCCA TTGACGTCAA 301 TGGGTGGAGT ATTTACGGTA AACTGCCCAC TTGGCAGTAC ATCAAGTGTA TCATATGCCA 361 AGTACGCCCC CTATTGACGT CAATGACGGT AAATGGCCCG CCTGGCATTA TGCCCAGTAC 421 ATGACCTTAT GGGACTTTCC TACTTGGCAG TACATCTACG TATTAGTCAT CGCTATTACC 481 ATGGTGATGC GGTTTTGGCA GTACATCAAT GGGCGTGGAT AGCGGTTTGA CTCACGGGGA 541 TTTCCAAGTC TCCACCCCAT TGACGTCAAT GGGAGTTTGT TTTGGCACCA AAATCAACGG 601 GACTTTCCAA AATGTCGTAA CAACTCCGCC CCATTGACGC AAATGGGCGG TAGGCGTGTA 661 CGGTGGGAGG TCTATATAAG CAGAGCTCGT TTAGTGAACC GTCAGATCGC CTGGAGACGC 721 CATCCACGCT GTTTTGACCT CCATAGAAGA CACCGGGACC GATCCAGCCT CCGGACTCTA 781 GAGGATCCGG TACTCGAGGA ACTGAAAAAC CAGAAAGTTA ACTGGTAAGT TTAGTCTTTT 841 TGTCTTTTAT TTCAGGTCCC GGATCCGGTG GTGGTGCAAA TCAAAGAACT GCTCCTCAGT 901 GGATGTTGCC TTTACTTCTA GGCCTGTACG GAAGTGTTAC TTCTGCTCTA AAAGCTGCGG 961 AATTGTACCC GCGGCCGCTC TAGAGCCACC ATGAGCCTGT GGCTGCCCAG CGAGGCCACC 1021 GTGTACCTGC CCCCCGTGCC CGTGAGCAAG GTGGTGAGCA CCGACGAGTA CGTGGCCAGG 1081 ACCAACATCT ACTACCACGC CGGCACCAGC AGGCTGCTGG CCGTGGGCCA CCCCTACTTC 1141 CCCATCAAGA AGCCCAACAA CAACAAGATC CTGGTGCCCA AGGTGAGCGG CCTGCAGTAC 1201 AGGGTGTTCA GGATCCACCT GCCCGACCCC AACAAGTTCG GCTTCCCCGA CACCAGCTTC 1261 TACAACCCCG ACACCCAGAG GCTGGTGTGG GCCTGCGTGG GCGTGGAGGT GGGCAGGGGC 1321 CAGCCCCTGG GCGTGGGCAT CAGCGGCCAC CCCCTGCTGA ACAAGCTGGA CGACACCGAG 1381 AACGCCAGCG CCTACGCCGC CAACGCCGGC GTGGACAACA GGGAGTGCAT CAGCATGGAC 1441 TACAAGCAGA CCCAGCTGTG CCTGATCGGC TGCAAGCCCC CCATCGGCGA GCACTGGGGC 1501 AAGGGCAGCC CCTGCACCAA CGTGGCCGTG AACCCCGGCG ACTGCCCCCC CCTGGAGCTG 1561 ATCAACACCG TGATCCAGGA CGGCGACATG GTGGACACCG GCTTCGGCGC CATGGACTTC 1621 ACCACCCTGC AGGCCAACAA GAGCGAGGTG CCCCTGGACA TCTGCACCAG CATCTGCAAG 1681 TACCCCGACT ACATCAAGAT GGTGAGCGAG CCCTACGGCG ACAGCCTGTT CTTCTACCTG 1741 AGGAGGGAGC AGATGTTCGT GAGGCACCTG TTCAACAGGG CCGGCGCCGT GGGCGAGAAC 1801 GTGCCCGACG ACCTGTACAT CAAGGGCAGC GGCAGCACCG CCAACCTGGC CAGCAGCAAC 1861 TACTTCCCCA CCCCCAGCGG CAGCATGGTG ACCAGCGACG CCCAGATCTT CAACAAGCCC 1921 TACTGGCTGC AGAGGGCCCA GGGCCACAAC AACGGCATCT GCTGGGGCAA CCAGCTGTTC 1981 GTGACCGTGG TGGACACCAC CAGGAGCACC AACATGAGCC TGTGCGCCGC CATCAGCACC 2041 AGCGAGACCA CCTACAAGAA CACCAACTTC AAGGAGTACC TGAGGCACGG CGAGGAGTAC 2101 GACCTGCAGT TCATCTTCCA GCTGTGCAAG ATCACCCTGA CCGCCGACGT GATGACCTAC 2161 ATCCACAGCA TGAACAGCAC CATCCTGGAG GACTGGAACT TCGGCCTGCA GCCCCCCCCC 2221 GGCGGCACCC TGGAGGACAC CTACAGGTTC GTGACCAGCC AGGCCATCGC CTGCCAGAAG 2281 CACACCCCCC CCGCCCCCAA GGAGGACCCC CTGAAGAAGT ACACCTTCTG GGAGGTGAAC 2341 CTGAAGGAGA AGTTCAGCGC CGACCTGGAC CAGTTCCCCC TGGGCAGGAA GTTCCTGCTG 2401 CAGGCCGGCC TGAAGGCCAA GCCCAAGTTC ACCCTGGGCA AGAGGAAGGC CACCCCCACC 2461 ACCAGCAGCA CCAGCACCAC CGCCAAGAGG AAGAAGAGGA AGCTGTGAAA GCTTTTTGAA 2521 TTCTTTGGAT CCACTAGTGT CGACTAGAGC TCGCTGATCA GCCTCGACTG TGCCTTCTAG 2581 TTGCCAGCCA TCTGTTGTTT GCCCCTCCCC CGTGCCTTCC TTGACCCTGG AAGGTGCCAC 2641 TCCCACTGTC CCCTAATAAA ATGAGGAAAT TGCATCGCAT TGTCTGAGTA GGTGTCATTC 2701 TATTCTGGGG GGTGGGGTGG GGCAGGACAG CAAGGGGGAG GATTGGGAAG ACAATAGCAG 2761 GCATGCTGGG GAGAGATCTA GGAACCCCTA GTGATGGAGT TGGCCACTCC CTCTCTGCGC 2821 GCTCGCTCGC TCACTGAGGC CGCCCGGGCA AAGCCCGGGC GTCGGGCGAC CTTTGGTCGC 2881 CCGGCCTCAG TGAGCGAGCG AGCGCGCAGA GAGGGAGTGG CCCCCCCCCC CCCCCCCCCC 2941 TGCAGCCCAG CTGCATTAAT GAATCGGCCA ACGCGCGGGG AGAGGCGGTT TGCGTATTGG 3001 GCGCTCTTCC GCTTCCTCGC TCACTGACTC GCTGCGCTCG GTCGTTCGGC TGCGGCGAGC 3061 GGTATCAGCT CACTCAAAGG CGGTAATACG GTTATCCACA GAATCAGGGG ATAACGCAGG 3121 AAAGAACATG TGAGCAAAAG GCCAGCAAAA GGCCAGGAAC CGTAAAAAGG CCGCGTTGCT 3181 GGCGTTTTTC CATAGGCTCC GCCCCCCTGA CGAGCATCAC AAAAATCGAC GCTCAAGTCA 3241 GAGGTGGCGA AACCCGACAG GACTATAAAG ATACCAGGCG TTTCCCCCTG GAAGCTCCCT 3301 CGTGCGCTCT CCTGTTCCGA CCCTGCCGCT TACCGGATAC CTGTCCGCCT TTCTCCCTTC 3361 GGGAAGCGTG GCGCTTTCTC AATGCTCACG CTGTAGGTAT CTCAGTTCGG TGTAGGTCGT 3421 TCGCTCCAAG CTGGGCTGTG TGCACGAACC CCCCGTTCAG CCCGACCGCT GCGCCTTATC 3481 CGGTAACTAT CGTCTTGAGT CCAACCCGGT AAGACACGAC TTATCGCCAC TGGCAGCAGC 3541 CACTGGTAAC AGGATTAGCA GAGCGAGGTA TGTAGGCGGT GCTACAGAGT TCTTGAAGTG 3601 GTGGCCTAAC TACGGCTACA CTAGAAGGAC AGTATTTGGT ATCTGCGCTC TGCTGAAGCC 3661 AGTTACCTTC GGAAAAAGAG TTGGTAGCTC TTGATCCGGC AAACAAACCA CCGCTGGTAG 3721 CGGTGGTTTT TTTGTTTGCA AGCAGCAGAT TACGCGCAGA AAAAAAGGAT CTCAAGAAGA 3781 TCCTTTGATC TTTTCTACGG GGTCTGACGC TCAGTGGAAC GAAAACTCAC GTTAAGGGAT 3841 TTTGGTCATG AGATTATCAA AAAGGATCTT CACCTAGATC CTTTTAAATT AAAAATGAAG 3901 TTTTAAATCA ATCTAAAGTA TATATGAGTA AACTTGGTCT GACAGTTACC AATGCTTAAT 3961 CAGTGAGGCA CCTATCTCAG CGATCTGTCT ATTTCGTTCA TCCATAGTTG CCTGACTCCC 4021 CGTCGTGTAG ATAACTACGA TACGGGAGGG CTTACCATCT GGCCCCAGTG CTGCAATGAT 4081 ACCGCGAGAC CCACGCTCAC CGGCTCCAGA TTTATCAGCA ATAAACCAGC CAGCCGGAAG 4141 GGCCGAGCGC AGAAGTGGTC CTGCAACTTT ATCCGCCTCC ATCCAGTCTA TTAATTGTTG 4201 CCGGGAAGCT AGAGTAAGTA GTTCGCCAGT TAATAGTTTG CGCAACGTTG TTGCCATTGC 4261 TACAGGCATC GTGGTGTCAC GCTCGTCGTT TGGTATGGCT TCATTCAGCT CCGGTTCCCA 4321 ACGATCAAGG CGAGTTACAT GATCCCCCAT GTTGTGCAAA AAAGCGGTTA GCTCCTTCGG 4381 TCCTCCGATC GTTGTCAGAA GTAAGTTGGC CGCAGTGTTA TCACTCATGG TTATGGCAGC 4441 ACTGCATAAT TCTCTTACTG TCATGCCATC CGTAAGATGC TTTTCTGTGA CTGGTGAGTA 4501 CTCAACCAAG TCATTCTGAG AATAGTGTAT GCGGCGACCG AGTTGCTCTT GCCCGGCGTC 4561 AATACGGGAT AATACCGCGC CACATAGCAG AACTTTAAAA GTGCTCATCA TTGGAAAACG 4621 TTCTTCGGGG CGAAAACTCT CAAGGATCTT ACCGCTGTTG AGATCCAGTT CGATGTAACC 4681 CACTCGTGCA CCCAACTGAT CTTCAGCATC TTTTACTTTC ACCAGCGTTT CTGGGTGAGC 4741 AAAAACAGGA AGGCAAAATG CCGCAAAAAA GGGAATAAGG GCGACACGGA AATGTTGAAT 4801 ACTCATACTC TTCCTTTTTC AATATTATTG AAGCATTTAT CAGGGTTATT GTCTCATGAG 4861 CGGATACATA TTTGAATGTA TTTAGAAAAA TAAACAAATA GGGGTTCCGC GCACATTTCC 4921 CCGAAAAGTG CCACCTGACG TCTAAGAAAC CATTATTATC ATGACATTAA CCTATAAAAA 4981 TAGGCGTATC ACGAGGCCCT TTCGTCTCGC GCGTTTCGGT GATGACGGTG AAAACCTCTG 5041 ACACATGCAG CTCCCGGAGA CGGTCACAGC TTGTCTGTAA GCGGATGCCG GGAGCAGACA 5101 AGCCCGTCAG GGCGCGTCAG CGGGTGTTGG CGGGTGTCGG GGCTGGCTTA ACTATGCGGC 5161 ATCAGAGCAG ATTGTACTGA GAGTGCACCA TATGCGGTGT GAAATACCGC ACAGATGCGT 5221 AAGGAGAAAA TACCGCATCA GGAAATTGTA AACGTTAATA TTTTGTTAAA ATTCGCGTTA 5281 AATTTTTGTT AAATCAGCTC ATTTTTTAAC CAATAGGCCG AAATCGGCAA AATCCCTTAT 5341 AAATCAAAAG AATAGACCGA GATAGGGTTG AGTGTTGTTC CAGTTTGGAA CAAGAGTCCA 5401 CTATTAAAGA ACGTGGACTC CAACGTCAAA GGGCGAAAAA CCGTCTATCA GGGCGATGGC 5461 CCACTACGTG AACCATCACC CTAATCAAGT TTTTTGGGGT CGAGGTGCCG TAAAGCACTA 5521 AATCGGAACC CTAAAGGGAG CCCCCGATTT AGAGCTTGAC GGGGAAAGCC GGCGAACGTG 5581 GCGAGAAAGG AAGGGAAGAA AGCGAAAGGA GCGGGCGCTA GGGCGCTGGC AAGTGTAGCG 5641 GTCACGCTGC GCGTAACCAC CACACCCGCC GCGCTTAATG CGCCGCTACA GGGCGCGTCG 5701 CGCCATTCGC CATTCAGGCT ACGCAACTGT TGGGAAGGGC GATCGGTGCG GGCCTCTTCG 5761 CTATTACGCC AGCTGGCTGC A //